Pseudomonas aeruginosa SCV20265, SCV20265_3556

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa SCV20265
GCF_000510305.1|latest
Locus Tag
SCV20265_3556
Name
Replicon chromosome
Genomic location 3806197 - 3806661 (+ strand)

Cross-References

RefSeq YP_008982562.1
GI 568310293
Entrez 18073508
NCBI Locus Tag SCV20265_3556

Product

Feature Type CDS
Coding Frame 1
Product Name
Hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 5.03
Kyte-Doolittle Hydrophobicity Value -0.163
Molecular Weight (kDa) 16.4
Isoelectric Point (pI) 8.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4EQ8 UNKNOWN FUNCTION 04/18/12 Crystal structure of PA1844 from Pseudomonas aeruginosa PAO1 Pseudomonas aeruginosa 1.392 X-RAY DIFFRACTION 100.0
4FGE HYDROLASE 06/04/12 Structure of the effector protein Tse1 from Pseudomonas aeruginosa Pseudomonas aeruginosa 1.7 X-RAY DIFFRACTION 100.0
4FQA TOXIN 06/25/12 Crystal structure of toxic effector Tse1 Pseudomonas aeruginosa PAO1 2.1 X-RAY DIFFRACTION 100.0
4FGI HYDROLASE/HYDROLASE INHIBITOR 06/04/12 Structure of the effector - immunity system Tse1 / Tsi1 from Pseudomonas aeruginosa Pseudomonas aeruginosa 3.2 X-RAY DIFFRACTION 100.0
4FGD HYDROLASE 06/04/12 Structure of the effector protein Tse1 from Pseudomonas aeruginosa, selenomethionine variant Pseudomonas aeruginosa 2.6 X-RAY DIFFRACTION 100.0
4FQB TOXIN/IMMUNE SYSTEM 06/25/12 crystal structure of toxic effector Tse1 in complex with immune protein Tsi1 Pseudomonas aeruginosa PAO1 2.69 X-RAY DIFFRACTION 100.0
4EOB HYDROLASE 04/13/12 Structure of the type VI peptidoglycan amidase effector Tse1 from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.611 X-RAY DIFFRACTION 100.0
3VPJ HYDROLASE/HYDROLASE INHIBITOR 03/04/12 crystal structure of type VI effector Tse1 from Pseudomonas aeruginosa in complex with immune protein Tsi1 Pseudomonas aeruginosa 2.5 X-RAY DIFFRACTION 100.0
3VPI HYDROLASE 03/04/12 Crystal structure of type VI effector Tse1 from Pseudomonas aeruginosa Pseudomonas aeruginosa 1.5 X-RAY DIFFRACTION 100.0
4F0V HYDROLASE 05/05/12 Crystal structure of type effector Tse1 from Pseudomonas aeruginousa Pseudomonas aeruginosa 1.6 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 3 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003556 (300 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: SCV20265_3556

Human Homologs

References

No references are associated with this feature.