Pseudomonas putida H8234, L483_32390

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida H8234
GCF_000410575.1|latest
Locus Tag
L483_32390
Name
Replicon chromosome
Genomic location 6864510 - 6865820 (- strand)

Cross-References

RefSeq YP_008098211.1
GI 512580202
Entrez 16174777
INSDC AGN81243.1
NCBI Locus Tag L483_32390
UniParc UPI00034F2260
UniProtKB Acc R9VD10
UniProtKB ID R9VD10_PSEPU
UniRef100 UniRef100_R9VD10
UniRef50 UniRef50_Q4KKR1
UniRef90 UniRef90_Q1IH37

Product

Feature Type CDS
Coding Frame 1
Product Name
16S rRNA methyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) -1.12
Kyte-Doolittle Hydrophobicity Value -0.096
Molecular Weight (kDa) 47.3
Isoelectric Point (pI) 6.78

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 581 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000017 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: L483_32390

Human Homologs

Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 5.0e-24
Percent Identity: 30.7
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 5.0e-24
Percent Identity: 30.7
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 5.0e-24
Percent Identity: 30.7
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 5.0e-24
Percent Identity: 30.7
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 5.0e-24
Percent Identity: 30.7
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 5.0e-24
Percent Identity: 30.7

References

No references are associated with this feature.