Pseudomonas putida H8234, L483_32390
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida H8234, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACCGGCCCAATGCTGCTCAAGGTGGTCACCCCAATCAGCGCCGACGACACCGGCGGCACCTTGCATGATCGCTTGGCCGAAATGGGCCCGCCCGCAGTCG TTCAGGCCATCGCTGGCCTCGCCGACGGTTCGCTGCAAGCTGAAACGCAAGACGATGCCCTGGCCACCTACGCCCACAAGCTGAACAAGGACGAGGCGCG CATTGACTGGACCCGCCCGGCCGTCGAGCTGGAGCGCCTGATCCGCGCCTTCAACCCGTGGCCGGTGTGCCACAGCACCCTCGATGGCGAAAGCGTGAAG GTGCTGGCCGCCAACTTGTCCACAGGCAAGGGCGCCCCGGGCGAAATCCTGTCCGCCAGCAAGGACGGCCTGGTCGTTGCGTGCGGCGACCAGGCGCTGA GCCTGACCCGCCTGCAATTGCCCGGCGGCAAGGCGCTGAACTTCAGCGACCTGTTCAACAGCCGCCGCGAGAAGTTCGCCGCTGGCAAGGTGCTGGGCCA
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| DNA Sequence for Gene |
>L483_32390
ATGAACCCACGTCTCGCCGCTGCCCGTGCCCTTGCCGCTGTACTCAGTGGCAAGGCCTCGCTGAACAGCTCGCTGCCAGCACAACTGGACAAGGTCGATG AACGCGACCGTGGCCTGACCCAGGACTTGGCGTTCGGCACCGCACGCTGGCAGCCACGCCTCGACCTGCTGGCCGCGCAACTGCTGCAAAAGCCTTTCAA GGCCGCCGACGCCGATGTGCAGGCGCTGCTGCTGGTCGGCCTTTATCAGTTGTTCTACACCCGCATTCCGGCCCACGCCGCCATCGGCGAAACCGTGGGC TGTGCCGACAAGCTGAAAAAGCCGTGGGCCAAGGGCCTGCTCAATGCCGTGCTGCGCCGCGCCCAGCGCGAAGGCGAAGCACTGCTCGCCGGCATGGAGC GCGACCCAGTGGTACGCACCGCCCACCCGCGCTGGCTGCAGAAGGCGCTGAAAGCCTTCTGGCCGGAGCAGTGGGAAGCCATTTGCGCCGCCAACAACGC CCACCCGCCGATGATTCTGCGGGTCAACCGCCGTCACCACAGCCGCGATGCGTACCTTGCACTGCTGGCCGACGCGGGCATTGACGCCAGCGCCTGCCAG TACAGCCGTGACGGCATCGTGCTGGCCGAGGCCTGCGACGTGCGCGGCCTGCCCGGCTTCGCCGAAGGCTGGGTGAGCGTGCAGGACGAAGCCGCGCAGC TGTCTGCCGACTTGCTCGAACTGGCCCCCGGCCAGCGCGTACTGGACGCCTGCTGCGCCCCAGGGGGCAAAACCTGCCACTTGCTGGAGGCCGAAGCCGG CCTGGCGCAGATGGTGGCCATCGACCTTGAAGCCAAGCGCCTGACCCGCGTGCGCGAGAACCTCGACCGCCTGCAACTGGACGCCGAGCTGATCGCCTGC GATGCCCGCGACACCGCCAGCTGGTGGGACGGCAAGCCGTTCCAGCGCATCCTGCTCGACGCGCCGTGTTCGGCCACCGGCGTAATCCGCCGTCACCCGG ACATCAAGCTGACCCGCCAGGCCGACGACATCCCGGCCCTGGCAACACTGCAAGGCGAGCTTCTCGACGCCCTGTGGCCGACCCTGGAAGTAGGCGGCAT GCTGCTGTACGCCACCTGCTCCAGCCTGCCGACCGAGAATACCGACGTGATCGGCGCCTTCCTGGCCCGCACCCCGGGCGCCCGTGAACTGGACCTGGCC ACCGAGGCCGGCCTGCGCCAGCCCCACGGCCGCCAGTTGCTGGCCCAGGAGGGCGGCCACGACGGCTTCTACTATGCCAAGCTGATCAAGATCGCCGCCT CACGCGGATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GACCAAACGGTAGGGAGTAGCGGATGAAGATCATCATCCTCGGCGCAGGGCAGGTAGGCGGTACGCTGGCAGAGCACCTGGCCAGCGAAGCCAACGACAT CACCGTGGTCGACACCGATGGCGAGCGCTTGCGCGACCTCGGTGACCGCCTGGACATCCGTACCGTGCAGGGCCGCGGTTCGCTGCCGACGGTGCTGCGC CAGGCCGGTGCCGACGACGCCGACATGCTGGTGGCAGTGACCAACAGCGACGAAACCAACATGGTCGCCTGTCAGGTGGCCTATTCGCTGTTCCACACCC CGACCAAGATCGCCCGGGTGCGTGAATCGTCCTACCTGACACGCGAAGAGCTGTTCGACAACGACCATATCCCGGTCGACGTGCTGATCAGCCCAGAGCA AGTGGTGACCAACTACATCAAGCGCCTGATCGAACACCCAGGCTCACTGCAGGTGATCGACTTCGCCGAAGGCAAGGCCCAGCTTGTGGCGGTGAAGGCT
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| Amino Acid Sequence |
>16S rRNA methyltransferase
MNPRLAAARALAAVLSGKASLNSSLPAQLDKVDERDRGLTQDLAFGTARWQPRLDLLAAQLLQKPFKAADADVQALLLVGLYQLFYTRIPAHAAIGETVG CADKLKKPWAKGLLNAVLRRAQREGEALLAGMERDPVVRTAHPRWLQKALKAFWPEQWEAICAANNAHPPMILRVNRRHHSRDAYLALLADAGIDASACQ YSRDGIVLAEACDVRGLPGFAEGWVSVQDEAAQLSADLLELAPGQRVLDACCAPGGKTCHLLEAEAGLAQMVAIDLEAKRLTRVRENLDRLQLDAELIAC DARDTASWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQADDIPALATLQGELLDALWPTLEVGGMLLYATCSSLPTENTDVIGAFLARTPGARELDLA TEAGLRQPHGRQLLAQEGGHDGFYYAKLIKIAASRG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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