Pseudomonas aeruginosa JJ692, Q008_03292
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa JJ692 - Assembly GCF_000481805.1
GCF_000481805.1|latest |
| Locus Tag |
Q008_03292
|
| Name |
|
| Replicon | scaffold_2 |
| Genomic location | 777835 - 779514 (- strand) |
Cross-References
| RefSeq | WP_003088082.1 |
| GI | 489178576 |
| NCBI Locus Tag | Q008_03292 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
nuclease
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -11.02 |
| Kyte-Doolittle Hydrophobicity Value | -0.285 |
| Molecular Weight (kDa) | 64.5 |
| Isoelectric Point (pI) | 5.68 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 5Y7G | HYDROLASE/DNA | 08/17/17 | Crystal structure of paFAN1 bound to 1nt 5'flap DNA with gap | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SYNTHETIC CONSTRUCT | 3.4 | X-RAY DIFFRACTION | 99.5 |
| 5Z6W | HYDROLASE/DNA | 01/25/18 | Crystal structure of paFAN1 bound to 2nt 5'flap DNA with gap with Manganese | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SYNTHETIC CONSTRUCT | 3.2 | X-RAY DIFFRACTION | 99.5 |
| 5Y7Q | HYDROLASE/DNA | 08/17/17 | Crystal structure of paFAN1 bound to 2nt 5'flap DNA with gap | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SYNTHETIC CONSTRUCT | 2.7 | X-RAY DIFFRACTION | 99.5 |
| 4R8A | Hydrolase/DNA | 08/30/14 | Crystal structure of paFAN1 - 5' flap DNA complex | Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT | 3.2 | X-RAY DIFFRACTION | 99.5 |
| 4R89 | Hydrolase/DNA | 08/30/14 | Crystal structure of paFAN1 - 5' flap DNA complex with Manganase | Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT | 4.002 | X-RAY DIFFRACTION | 99.5 |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003538 (532 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Q008_03292
Search term: nuclease
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
FANCD2 and FANCI associated nuclease 1 [Source:HGNC Symbol;Acc:HGNC:29170]
E-value:
2.2e-16
Percent Identity:
31.8
|
|
Ensembl
110, assembly
GRCh38.p14
|
FANCD2 and FANCI associated nuclease 1 [Source:HGNC Symbol;Acc:HGNC:29170]
E-value:
2.2e-16
Percent Identity:
31.8
|
|
Ensembl
110, assembly
GRCh38.p14
|
FANCD2 and FANCI associated nuclease 1 [Source:HGNC Symbol;Acc:HGNC:29170]
E-value:
2.2e-16
Percent Identity:
31.8
|
|
Ensembl
110, assembly
GRCh38.p14
|
FANCD2 and FANCI associated nuclease 1 [Source:HGNC Symbol;Acc:HGNC:29170]
E-value:
2.2e-16
Percent Identity:
31.8
|
|
Ensembl
110, assembly
GRCh38.p14
|
FANCD2 and FANCI associated nuclease 1 [Source:HGNC Symbol;Acc:HGNC:29170]
E-value:
2.2e-16
Percent Identity:
31.8
|
|
Ensembl
110, assembly
GRCh38.p14
|
FANCD2 and FANCI associated nuclease 1 [Source:HGNC Symbol;Acc:HGNC:29170]
E-value:
2.2e-16
Percent Identity:
31.8
|
References
No references are associated with this feature.