Pseudomonas chlororaphis subsp. aureofaciens 30-84, PCHL3084_RS16600 (mexF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis subsp. aureofaciens 30-84 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACAACCAGGTCAACCCGCAGACCGGCACCATCCGCGGTCGCGCGGTGTTCGACAACGCCGACGGCAGCTACACCCCGGGCCTCTATGCGCGCCTGAAACT GGTGGGCAGCGGCACCTACTCCGCCGTGCTGATCAACGACGAAGCGGTGGGGACCGACCTGGGCAAGAAGTTCGTGTTGGTGATGGATGCCGACAACAAG CCGGCGTACCGCGCCGTCGAGCTGGGGCCGAAGATCGAAGGCCTGCGCATCGTGCGCAACGGCCTGAACAAGGACGACACCATCATCGTCAAGGGTCTGC AGCGTGCCCGTCCGGGCGCGCCGGTCAGCCCTGAAGTGGTGCCGATGGCCAGCAAGGAAACCCTCGCCGCCCTGGCGCAACAAAGAAAGGCCCTGGAAGC CAGCAACCTGCCTCAAGTCGCCCCCGCCAAGGGCGCGTCTGAAGCGGCTGCGAAACTGGCCAGCGCTGCGACTCCACGCGGTTAAGGGAAAAGACTCAAG
DNA Sequence for Gene
>PCHL3084_RS16600 |mexF
ATGAATTTCTCCCAATTCTTCATTTCACGGCCGATCTTCGCAGCGGTGCTGTCGCTGCTGATCCTGATCGCCGGCTCCATTTCGCTGTTCCAGCTGCCCA TCAGCGAATACCCGGAAGTGGTACCGCCGACCGTGGTGGTGCGCGCCAACTTCCCGGGCGCCAACCCGAAAGTCATAGGTGAAACCGTGGCCGCGCCCCT GGAGCAGGCCATCACCGGCGTCGAGAACATGCTCTACATGTCCTCGCAGTCCACCGCCGATGGCAAGATCACCCTGACCATCACCTTCGCCCTGGGTACC GACCTGGACAACGCCCAGGTGCAGGTGCAGAACCGCGTGACCCGCACCGAGCCCAAGCTGCCTGAAGAGGTGACGCGCATCGGCATCACCGTGGACAAGG CCTCGCCCGACCTGACCATGGTCGTGCACTTGACCTCGCCGGACAAACGCTACGACATGCTCTACCTGTCCAACTACGCCATCCTCAATATCAAGGATGA GCTGGCGCGCCTGGGCGGCGTCGGCGATGTGCAGCTGTTCGGCATGGGCGACTACTCGCTGCGGGTCTGGCTCGATCCGAACAAGACCGCTTCGCGCAAC CTGACCGCCACCGACGTGGTCACCGCCATTCGCGAGCAGAACCGCCAGGTCGCCGCCGGTACCCTGGGCGCCCCGCCCGCGCCGAGCGCCACCAGCTTCC AGCTGTCGGTCAACACCCAGGGCCGCCTGGTGACCGAGGAAGAGTTCGAGAACATCATCATCCGCTCCGGCGACAACGGCGAGATCACCCGCCTGAAAGA CATCGCCCGGGTCGAGCTGGGTTCCAACCAGTACGCCCTGCGTTCGCTGCTGAACAACCAGCCGGCAGTGGCGATCCCGATCTTCCAGCGCCCTGGCTCC AACGCCATCGAGATCTCCAACGAAGTGCGGGCCAAGATGGCCGAGCTGAAACAGAGCTTCCCGCAAGGCATGGACTTCAGCATCGTCTACGACCCGACCA TCTTCGTGCGTGGCTCCATCGAGGCAGTGGTGCATACCCTGTTCGAAGCACTGATCCTGGTGGTGCTGGTGGTGATCCTGTTCCTGCAGACCTGGCGCGC CTCGATCATCCCGCTGGTGGCGGTGCCGGTCTCGCTGATCGGTACCTTTGCCGTGATGCACCTGTTCGGCTTCTCGCTCAACGCCCTGTCGCTGTTCGGG CTGGTGCTGGCCATCGGTATCGTGGTGGACGACGCCATCGTGGTGGTGGAAAACGTCGAGCGTAATATCGGCCTCGGCCTGAACCCGGTGGAAGCCACCA AGCGCGCCATGCGCGAAGTGACCGGGCCGATCATCGCCACCGCCCTGGTGCTCTGCGCGGTGTTCGTGCCGGCGGCCTTCATCAGCGGCCTGACCGGGCA GTTCTACAAGCAGTTCGCCCTGACCATCGCGATCTCCACGGTGATCTCGGCCTTCAACTCCCTGACCCTGTCGCCGGCCCTGGCCGCGGTATTGCTCAAG GATCACCACGCCCCGAAGGACGGCTTCTCCAAGTTCCTCGACAAGTTGCTGGGTGGCTGGCTGTTCAAACCCTTCAACCGCTTCTTCGACCGCGCCAGCC ATGGTTACGTCGGCACCGTGCGCCGGGTGATTCGTGGCAGCGGCATCGCCCTGTTCCTCTACGCGGGCCTGATGGTGCTGACCTGGTTCGGCTTCGCCCA TACGCCGATGGGCTTCGTCCCGGCCCAGGACAAGCAGTACCTGGTGGCCTTCGCCCAACTGCCGGACGCCGCGAGCCTGGACCGTACCGAGGACGTGATC AAGCGCATGTCCGACATCGCCCTGAAGCAACCGGGCGTGGAAAGCGCAGTGGCCTTCCCCGGCCTGTCGATCAACGGTTTCACCAACAGCCCGAACAACG GCATCGTGTTCGTGACCCTCAAGCCTTTCGACGAGCGCAAGGACCCGAGCATGTCCGCCGGGGCCATCGCCGGCGCCCTGAACGGCAAGTACGCCGATAT CCAGGAAGCCTACATGGCGATCTTCCCACCGCCGCCGGTACAGGGCCTGGGGACCATCGGCGGGTTCCGCCTGCAGGTCGAGGACCGCAGCGGCATGGGT TACGAAGAACTGTATAAAGAAGTGCAGAACGTCATCGCCAAGAGTCGCAGCGTGCCGGAACTGGCCGGGCTGTTCACCAGCTATCAGGTCAACGTGCCCC AGGTCGACGCGGCTATCGACCGGGAAAAGGCCAAGACCCACGGCGTGGCCATCAGCGATATCTTCGACACCCTGCAGGTCTACCTGGGCTCGCTGTACGC CAACGACTTCAACCGTTTTGGCCGTACCTACCAGGTCAACGTCCAGGCCGAACAGCAGTTCCGTCTCGAAGCCGAGCAGATCGGCCAGCTGAAAGTACGC AACAACAAGGGCGAGATGATCCCGCTGGCGACCTTCATCAAGGTCAGTGACACCGCCGGTCCCGACCGCGTGATGCACTACAACGGCTTCGTCACCGCGG AAATCAACGGCGCGGCCGCACCGGGCTACAGCTCCGGCCAGGCGGAAGCGGCGATCGAGAAACTGCTCAAGGAAGAGCTGCCCAACGGCATGACCTACGA ATGGACCGAGCTGACCTACCAGCAGATCCTGGCCGGTAACACCGCGCTGTTCGTCTTCCCGCTCTGCGTGCTGCTGGCGTTCCTGGTACTGGCCGCGCAA TACGAGAGCTGGAGCCTGCCGCTGGCGGTGATCCTGATCGTGCCCATGACCCTGCTGTCGGCCATCGCCGGGGTGATCCTATCCGGTGGCGACAACAACA TCTTTACCCAGATCGGTTTGATCGTACTGGTGGGTCTGGCCTGTAAGAACGCGATCTTGATCGTCGAGTTCGCCAAGGACAAGCAGGAAGAAGGCCTCGA CCCGCTGGCCGCGGTCCTGGAAGCCTGCCGCCTGCGTCTGCGGCCGATCCTGATGACCTCGTTCGCCTTCATCATGGGTGTGGTGCCCCTAGTGTTCTCC AGCGGCGCCGGCGCGGAAATGCGTCATGCCATGGGTGTCGCGGTGTTCTCCGGGATGCTCGGGGTGACCTTCTTCGGCCTGCTGCTGACCCCGGTGTTCT ACGTCCTGATCCGCAACTATGTGGAGCGCAGCGAAGCCCGCAAAGCGACCCGAGCCCTGAAACTGGAGGCGCAACAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTGAAAGTCTTCCTGCCGAGTTTGCTGGCACTGGCCCTGAGCGCCTGTGCCGTCGGCCCGGACTACCAGACCCCGACCACCGAGGCGGCCCACATCAC GGCCGCCGCCGATGGCGCCGCGGGCCAGAAGCAGTTCGACCGCGCGCGCTTCGAAGGCATCTGGTGGCAGCAGTTCGACGACCCGGTGCTCAACCAGCTG GTGACAAAGTCCCTGCAGGGCAACCGTGAATTGCGCGTGGCCTTCGCCCGTCTGCGGGCCGCCCGGGCGATCCGCGACGACGCCAGCAACGATGCGATGC CGACCATCACCAGCCGCGCCAGCAGCGATCTGGCCAAGGGGCAGATCCCCGGCCAGACCACCCGCCGGGTCAACAGCGAACGCTACGACCTGGGCCTGGA CATGGCCTGGGAACTGGACCTGTTCGGCCGCATCCAGCGCAACCTGGAAGCCAGCGAAGCCGACCAGCAGGCCGCCGAGGCCGACCTCTACCAGCTGCAA
Amino Acid Sequence
>transporter
MNFSQFFISRPIFAAVLSLLILIAGSISLFQLPISEYPEVVPPTVVVRANFPGANPKVIGETVAAPLEQAITGVENMLYMSSQSTADGKITLTITFALGT DLDNAQVQVQNRVTRTEPKLPEEVTRIGITVDKASPDLTMVVHLTSPDKRYDMLYLSNYAILNIKDELARLGGVGDVQLFGMGDYSLRVWLDPNKTASRN LTATDVVTAIREQNRQVAAGTLGAPPAPSATSFQLSVNTQGRLVTEEEFENIIIRSGDNGEITRLKDIARVELGSNQYALRSLLNNQPAVAIPIFQRPGS NAIEISNEVRAKMAELKQSFPQGMDFSIVYDPTIFVRGSIEAVVHTLFEALILVVLVVILFLQTWRASIIPLVAVPVSLIGTFAVMHLFGFSLNALSLFG LVLAIGIVVDDAIVVVENVERNIGLGLNPVEATKRAMREVTGPIIATALVLCAVFVPAAFISGLTGQFYKQFALTIAISTVISAFNSLTLSPALAAVLLK DHHAPKDGFSKFLDKLLGGWLFKPFNRFFDRASHGYVGTVRRVIRGSGIALFLYAGLMVLTWFGFAHTPMGFVPAQDKQYLVAFAQLPDAASLDRTEDVI KRMSDIALKQPGVESAVAFPGLSINGFTNSPNNGIVFVTLKPFDERKDPSMSAGAIAGALNGKYADIQEAYMAIFPPPPVQGLGTIGGFRLQVEDRSGMG YEELYKEVQNVIAKSRSVPELAGLFTSYQVNVPQVDAAIDREKAKTHGVAISDIFDTLQVYLGSLYANDFNRFGRTYQVNVQAEQQFRLEAEQIGQLKVR NNKGEMIPLATFIKVSDTAGPDRVMHYNGFVTAEINGAAAPGYSSGQAEAAIEKLLKEELPNGMTYEWTELTYQQILAGNTALFVFPLCVLLAFLVLAAQ YESWSLPLAVILIVPMTLLSAIAGVILSGGDNNIFTQIGLIVLVGLACKNAILIVEFAKDKQEEGLDPLAAVLEACRLRLRPILMTSFAFIMGVVPLVFS SGAGAEMRHAMGVAVFSGMLGVTFFGLLLTPVFYVLIRNYVERSEARKATRALKLEAQQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site