Strain | Pseudomonas chlororaphis subsp. aureofaciens 30-84 chromosome, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AATCCTAACCCATGTCCGCGCCTATGACTTCTGCTCATAACGGTACGTTATGAAGGAAGGATGGTCTCGGGTTCGCGAATGAGGGTGATGCCCGATTGCA CGAGGAGAAACTGGTTGTCGTCCATTTTGTTGACGCGATCGCCAATGGCCAGGCGATAGGTGGTGACGGGCTCCGAGCCGGCGATACCCTCTGGCGAGGG GGTGGATTCCTGGAACTCATGCACCGAATAGACACGGCCTTCCGCGTCCCTTGCATGAAATTGTCCGACGAGTACTGCTGCCATCTTTAGAGCCTCTGGA GATAAAACACTCAATTTGCGGTCCTGTAGACCGTGCTTGGGCGAACTAAGTTTAGCGGCGGAAAAAAAATAGTCCGCGGCCCTGATTGCAGCTGGCGTGA AGCCTGGAAAAGCTCACGGAACTTCCTTCGACGGGTGGCTGTGGGCGGGGTGGATCATCTATAACTATCAGCCTCCTCAACCAGAAGTCGGGAATTCGCT
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DNA Sequence for Gene |
>PCHL3084_RS13815
ATGAGCAACGTTTACACGATTGCAGTACTGGTGGGCAGCCTGAGAAAGGCCTCGATCAACCGGAAAGTGGCGCTGGCCCTCGCGGAACTGGCGCCGGCCA ACCTGCGGCTGAAGATTGTCGAGATCGGCGACCTGCCGCTCTACAACGAAGACATCGATGTGGATCCACCGGCAGCCTACAGGACTTTCCGTGAACAGGT GAGAGCAGCCGACGCCGTGCTGTTCGTCACTCCGGAATACAACCGCTCGGTTCCCGCACCGATGAAAAACGCCATCGACGTGGGGTCGCGTCCCTACGGC AAGAGCGCCTGGAGCGGCAAGCCGGGGGCAGTGATCAGCGCCTCCCCGGGCGCGATCGGCGGTTTTGGCGCCAACCATCACCTGCGCCAGTCCCTGGTGT TCCTCAATGTGCCATGCATGCAGCAGCCGGAAGCCTACCTGGGCGGCGCGGGCTCGGCCTTCGACGAGGCGGGCAAGCTGTCCGAGTCGGTCAAGCCGTT CCTGCAGAACTTCATCAACGCCTATGCCCAGTGGGTCGAGCAGCACAAAAAGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCTGGCGCCGCGGGAGTCGGTCAGTCGGCTCCCGTAGGTAATGGAATATTCCACTCGCCACGGTAAAAGCGCTTTACCGCATATCTGAATATTCATATA TTCGCCGCTCCAAATGCCTGGAGTGGCCCTGGTGTCCGACTCTCTCAACCCCGCCGAGCTGTTCAAGGCGCTTGCCGACGAAACCCGCAGCCGCATCGCC TTGCTCGTGACCCGCGAAGGCGAATTGTGTGTCTGTGAGCTGACCGCCGCCCTGGGCCAGAGCCAGCCGAAGATCTCCCGGCACCTGGCGCTGTTGCGCA GCTGCGGCCTGCTGGCCGATCGCCGCCAGGGGCAATGGATCTACTACCGGCTGCACCCGCAATTGTCACCCTGGGTGAGCACCCTGCTGCAGGACACGCT GGAGGCCAACAGCCCCTGGCTGCAGGAGGACCTGCAACGCCTGCAGACCATGATCGATCGCCCCGTGCGCTGCTGCTGAGTTCCCCCTTTACCTCACTTT
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Amino Acid Sequence |
>ACP phosphodiesterase
MSNVYTIAVLVGSLRKASINRKVALALAELAPANLRLKIVEIGDLPLYNEDIDVDPPAAYRTFREQVRAADAVLFVTPEYNRSVPAPMKNAIDVGSRPYG KSAWSGKPGAVISASPGAIGGFGANHHLRQSLVFLNVPCMQQPEAYLGGAGSAFDEAGKLSESVKPFLQNFINAYAQWVEQHKKP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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