Pseudomonas chlororaphis subsp. aureofaciens 30-84, PCHL3084_RS11775
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0004519 | endonuclease activity |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.90.540.10
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF54060 | His-Me finger endonucleases | IPR044925 | His-Me finger superfamily | 307 | 434 | 8.24E-48 |
| SMART | SM00507 | HNH_5 | IPR003615 | HNH nuclease | 375 | 431 | 5.2E-4 |
| SUPERFAMILY | SSF69369 | Cloacin translocation domain | IPR036302 | Pyosin/cloacin translocation domain superfamily | 145 | 332 | 1.83E-17 |
| Gene3D | G3DSA:3.90.540.10 | Colicin/pyocin, DNase domain | IPR037146 | Colicin/pyocin, DNase domain superfamily | 305 | 437 | 1.2E-54 |
| Pfam | PF06958 | S-type Pyocin | IPR016128 | Pyosin/cloacin translocation domain | 175 | 304 | 6.5E-26 |
| CDD | cd00085 | HNHc | IPR003615 | HNH nuclease | 397 | 434 | 2.08708E-6 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 22 | 36 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1 | 36 | - |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.