Pseudomonas chlororaphis subsp. aureofaciens 30-84, PCHL3084_RS08340

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis subsp. aureofaciens 30-84 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AATACGAACAACTCAATGCCATCAACCGCTTCTTCAACCAGCAACTGAGCTTCAAGGAGGACCAGCGCACCTGGCAGCAGGGCGATTATTGGGCCACGCC GATCGAGGCCCTGCTCAAGGGCGCCGGGGATTGCGAGGACTATGCACTGGCCAAGTATTTCAGCCTGCGCAGCCTGGGGGTCTCCAGCGACAAACTGCGC CTCACTTACGTCAAGGCCAGGCGCGGCAACCGGCCGCACATGGTCCTGGCCTATTACCCCAGCCCCGGCGCCGGACCGCTGATACTGGACAACCTCAGCA GCGACATTCGTTCCGCCGCCCAGCGCCAGGATCCGAACCCGGTATACGCCTTCAATGCCGAGGGGCTGTACCTGCCCGGAGTGGCTGGCGACACGCGCAG CATCGACCCGAAAAAACTCTCGCGCTGGCAGGACGTACTGAAAAAGATGCGGGACGAGGGCTTCACGGTGGGTAATGGCTGATCCGACAAGGAGTGCCGA
DNA Sequence for Gene
>PCHL3084_RS08340
ATGTCGCTACTCAAGCAACTGTTCATCGCCATCTGCCTGTTCCTGCTGGTGGCCTTCAGCGGCAGTTTTTTTGTCAGCCTGGAAAGCTCCCGCGAGCAGA TGCTCAACCAGCTGCGCTCCCACGCCCAGGATGCGGCCACCGCCCTGGGCCTGTCCCTGACCAGCCAGGTCGACGACCCGGCGATGATGGAACTGATGGT CAGTTCGATCTTCGACAGCGGCTACTACAACAGCATCCGGGTGGTGAACATCGAAGACGAAAGCATTCTGCTGGAGCGTTCGGTGCCTGCCAGGATCGAG GGCATACCCCAGTGGTTCGTCAGGCTAGTGAGCCTGCGCCCGCAAGGTGGCGACGCCCTGGTCATGCGTGGCTGGGAACAGGTGGCGCGGGTGGAAGTGC TGAGCAACCCGCAGTTCGCCCTGGCCAGGCTCTGGGACAGCAGCGTCGGCAGCCTGCTCTGGCTGCTGGTGTGCGGCTTGCTCAGCGCGGTGTTCGGCGG CTGGCTGCTGCGGCGCCAGTTGCGACCGCTGGACGCCATGGTCAGGCAGGCCGAAGCCATCAGCCACCGCGAGTTCCTCAGCCTGCCGACGGTGCCGCGC ACGCCCGAGCTCAAGCGGGTGGTCCTGGCCATGAACCAGATGGTGGAAAAACTCAAAGCCCTGTTCGCCGAAGAGGCCGCGCGCAGCGAGAAACTGCGGG CCGAGTCCTATCAGGACAGCCTGACCGGCCTGGCCAACCGGCGCCTGCTGGACGAACAGCTCGGCGATCAGTTGCTGCTCAACGAGCAGAGTGGCGATGG TTATCTGCTGATGCTGCGGGTCAATGACCTCAGTGGCCTGAACCAGCGCCTGGGCGGCCAGCGCACCGACGCCCTGATCAAGAGCATCGGCGATCTGCTC AAGCGCATCAGCGCCCAGGCCGACCGCCGCCACTGGCTGGCGGCGCGCAATCGCGGCGGCGAATTCAGCCTGCTGACACCGGGACTGGACAGCCGCGGCG CCGAGCGCCTGGCCATGGAAATCAGCGCCACCCTGGAGAACCTGCGCCTGACCGCGGCCAGCGACTGCACACCGGTGGCGCACCTGGGCATAGTCGCCTA CCGGCCCGGCGACCCGCTGAGCGGCGTATGGTTGCGCCTGGACCAGGCGCTGGCGCAGGCCCAGCAGCACCCCGAGCGTCCCTGGGCATTGCTGCAGGAG TTCGCCGCCGGCCCCAGCCAGCCGCAGCATGACTGGCGCGCCTGGATCGACGACGCCCTGAGCAACGGCAAGTTGAAGTTGTATTTCCAGCCGGTGGTGC AGTGCGCCGACACCAGCGAGGTGCTGCATCACAAAGTGCTGGCGCGCTTGCTCGACCCGCAGGGCGAAGCCATTGCCGCCGGGCATTTCCTGCCGTGGAT CGAGCGCCTGGGCTGGTCGGCACGCTTCGACCTGGCCATGCTCGAACACACCCTGGATTATCTGCTCGAGCATACCTGGCCGCTGGCCCTGAGCCTGTCT GGCAGCACCCTGCGCGACCCCGACGCGTTGCGGCGGATCCTCGACCAGCTCAAGGCCCTGCCCGACCTGGCCAAGTTACTGACGCTGGAGATCGACGAAC GCCAACTGCCCTCGGCCAGCGAGTTGCAGCAATTGAGCCAGCGCCTGCGGGACAGCGGCTATCGTATCGGCCTGCAACATTTCGGCGGCAACTTCAGCCA GATCGGCAACCTCGCCCACCTCGGCCTGGCCTACCTGAAAGTCGATGGCAGCTACATCCGCGACATCGACCGGCAAAGCGACAAACAGCTGTTCATCGAG GCGATATTTCGCGCCACCCACAGCATCGACCTGCCGCTGATCGCCGAACGGGTCGAGACCCAGGGCGAACTGGACACCCTCAAGGCCCTGGGCCTGTTCG GGGTCATGGGGCGACTGATCGGCCCACCGGAACCGATGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCCTTCCCCGCACAGCCCCGACGCCAACCTCAGTCAAGGCTGGCGCCGGGCCCGCCGGCCATCAGACGGTATCGACCTTCAACGAATGGTCGTTGAGCA TGCCGTTGATGATGGTCGCGGTATCCGCGCCACCCGCGATCACTCCGCCCGCGCCCGGCGTCACCCCGTAGTGCTCCGCCAGGTTGACCCCGGCCAGATC GATGGTCTGGCTCGGCGAGGCCCCCGCCGCCGCGCTGACGTCGATGCTGGTGATCAGCGACGGACCGCTGCCAGTGACCGTGAAGTGCAGGTAATCATCC AGCGATGCGCTGCTGGCGTTCTCGCCCTGCAGCAGTTGCGACAGGTCGAGTTTGTCGATGCCCGGCGTGAAGTCGGTGACCAGGTCATGCCCGCTGTTGC CCTGCTGCCACTGGAAAGTGTCGCTGCCGCTGCCACCGGTCAGGGTGTTGTTGCCCATCCCGCCGATCAACAGGTCGTCGCCGCCACCGCCGTTGAGCAC
Amino Acid Sequence
>DeoR family transcriptional regulator
MSLLKQLFIAICLFLLVAFSGSFFVSLESSREQMLNQLRSHAQDAATALGLSLTSQVDDPAMMELMVSSIFDSGYYNSIRVVNIEDESILLERSVPARIE GIPQWFVRLVSLRPQGGDALVMRGWEQVARVEVLSNPQFALARLWDSSVGSLLWLLVCGLLSAVFGGWLLRRQLRPLDAMVRQAEAISHREFLSLPTVPR TPELKRVVLAMNQMVEKLKALFAEEAARSEKLRAESYQDSLTGLANRRLLDEQLGDQLLLNEQSGDGYLLMLRVNDLSGLNQRLGGQRTDALIKSIGDLL KRISAQADRRHWLAARNRGGEFSLLTPGLDSRGAERLAMEISATLENLRLTAASDCTPVAHLGIVAYRPGDPLSGVWLRLDQALAQAQQHPERPWALLQE FAAGPSQPQHDWRAWIDDALSNGKLKLYFQPVVQCADTSEVLHHKVLARLLDPQGEAIAAGHFLPWIERLGWSARFDLAMLEHTLDYLLEHTWPLALSLS GSTLRDPDALRRILDQLKALPDLAKLLTLEIDERQLPSASELQQLSQRLRDSGYRIGLQHFGGNFSQIGNLAHLGLAYLKVDGSYIRDIDRQSDKQLFIE AIFRATHSIDLPLIAERVETQGELDTLKALGLFGVMGRLIGPPEPM
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site