Strain | Pseudomonas chlororaphis subsp. aureofaciens 30-84 chromosome, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGGTCAAACGCGCCGAGCCCCAGGACCCGGCGCAGCTGCTGGCGAAGATCGGCGAGCTCAAGGCCTTCTACCACATCAGCGAGCACTGCCTGGAAACCC TGCTGCGGGCCGACGGCTACCTGGGCTGACCCTGTAGCCGCTGCCGCCGGCTGCGAACGACGGCGCAGCCGGCGCAAGGGCGCCCACTCCATCGTGCAGA TGCACCGCGGTGCCTGGTTTTGCGGCCCCTGCGGTGCCGATCGCAGCCTGCGGCAGCTTCCGTAGGAGCGAAGCTCGCTCGCGATGAACGATGACGCGGT GTATCAGGTAATCCGGGGTGCCTTGATCGCGGGCACCTCGAGATCACGGCCATTCACCCCGCTTTCGAGGAGGCTTGCCGGCGAAAAACGATGACGCGAT GTACGGATACGTTGCAGGCGTAGTACCGGGTTATTACCCGGCCCCGCGGATAGGGACTACCTTGAATACTCCTGTTTTCCCTTGAAGAGGAGTCATCTCC
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DNA Sequence for Gene |
>PCHL3084_RS07460
ATGGCCGCGAAAAAAATCCTCATGCTGGTCGGCGATTACGTCGAGGACTACGAAGTGATGGTGCCGTTCCAGGCGCTGCTGATGGTCGGCCACACCGTGC ATGGGGTGTGCCCGGACAAAAAGGCCGGGCAGACCGTGCGCACGGCGATCCACGACTTCGAAGGCGACCAGACCTACAGCGAAAAACCGGGCCATCAGTT CGCCCTGAATTTTGACTTCGCCAAGGTCGAGGCCGCCGATTACGACGCGCTGCTGATCCCTGGCGGTCGCGCCCCGGAATACCTGCGGTTGAACGAAAAA GTCCTGCAACTGGTGCAAGCCTTCGACCAGGCCGGCAAGCCGATCGCCGCCGTCTGCCACGGCGCCCAGCTGCTGGCCGCGGCGGGTATTCTCGAAGGCC GCGAGTGCAGTGCGTACCCGGCCTGTGCCCCGGAAGTGCGCCTGGCCGGCGGTACCTACATCGATATTCCCGTGACGGACAGCCACGTCCAAGGCAATCT GGCGACGGCCCCGGCCTGGCCGGCGCATCCCAGCTGGCTGGCCGGTTTCCTCGGTTTGCTGGGCACCAAAATCACGCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACGGCTGGCGATCCGGCGGCGTCCCAGCCTTGGGGGCGACGCCGGATCGCCCCGCCACACTTTCAAGGGAGGAACGCCAGCATGTGCGAGCTCTATGTCA AAGCCGACCCGATCCTCTACGAGTCCCGTTCGCGCTCGCTGCGCATCTGCGGGGTGGTCACGACCCTGCGCCTGGAAAACCAGTTCTGGGACATCCTCAG CGAAATCGCCGAGGTCGATGGCATGACCACCAACCAGCTGATCGCCAAGCTCTACGAAGAGGTGATGGACTACCGCGGCGAAGTGGTGAATTTCGCCTCG TTCCTGCGGGTCAGCTGCACCCGCTACCTGAGCCAGCGCCGCAGCGCCACGCCGGAACTCAGCGTGGTGCGCAGCGCCACCAAATAACCCCGCACCCTGT AGCCTGTAGCCGCTGCCGAGCCTGCGAGGCTGCGATCGCCCGCGTAGCGGGCGCAAAGCCAGGCAACGCCACGTATCAGACATACCGCGTTGTCAGGTTT
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Amino Acid Sequence |
>glutamine amidotransferase
MAAKKILMLVGDYVEDYEVMVPFQALLMVGHTVHGVCPDKKAGQTVRTAIHDFEGDQTYSEKPGHQFALNFDFAKVEAADYDALLIPGGRAPEYLRLNEK VLQLVQAFDQAGKPIAAVCHGAQLLAAAGILEGRECSAYPACAPEVRLAGGTYIDIPVTDSHVQGNLATAPAWPAHPSWLAGFLGLLGTKITL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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