Pseudomonas chlororaphis subsp. aureofaciens 30-84, PCHL3084_RS05085 (dppB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis subsp. aureofaciens 30-84 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATGATGCAGTCCGACCTGGCGAAGATCGGCCTCAAGATCGATATCCGCGTCATGGAATGGGGCGAGATGCTCAAGCGCGCCAAGAACGGCGAGCACGAC ATGGTTTCCGCCGGCTGGGCGGGGGATAACGGGGACCCGGACAACTTCCTGACCCCCAACCTCAGTTGCGAGGCCGCCAAAAACGGCGAAAACTACGCTC GCTGGTGCAATAAAGCGTTCCAGAGCCTGATCGATCAGGCCCGCGCCGAATCCGAGCCGGCCAAACGGACCGCACTCTATGAACAGGCCCAGGACATTTT CGACAAGGAACAACCCTGGATCCCCATGGCCTATCCGAAAATGTTCACGGCAATGCGCAAGAACGTCGAGGGCTACCACCAGAGCCCCCTGACCACCAAC AACTTCGCTACCACCCAGGTGAAGTAGATAAGAAACGCCCGGCATCCCTGACCCCAGGGGTGCCGGACACGCCTAACCGGCTGATGAGGTACACCAGAAG
DNA Sequence for Gene
>PCHL3084_RS05085 |dppB
ATGTTTAGTTTTATTGCCCGCCGTGTGGGGTTGTTGATTCCCACATTCTTCGGCATCACCTTGCTGACGTTCGCATTGATTCGCATGATTCCCGGCGATC CCGTGGAAGTCATGATGGGCGAGCGCCGGGTCGACCCTGAGATGCATGCCCAGGCAATGGAACGCCTTGGTCTGAACAAGCCGCTGTATGCCCAGTACCT GGACTACATCGGCAAACTCGCCCAGGGCGACCTGGGTGAATCCCTGCGGACTCGCGAGAGTGTGTGGAGCGAGTTCACCTCCCTGTTCCCCGCAACCCTG GAACTGGCCTCGGCCGCGATGCTGTTCGCTGCCGTGATCGGCCTGCTGGCCGGGGTGATCGCCGCGCTGAAACGAGGATCCCTGTTCGACCACGGGGTGA TGGGCATCTCCCTCGCCGGCTACTCGATGCCGATCTTCTGGTGGGGCCTGATCCTGATCATGTTCTTCTCCGTGAGCCTGGGCTGGACCCCGGTTTCCGG GCGGCTCGACCTGCTCTACGACATCGAGCCGAAAACCGGCTTCATGCTTATCGACACCCTGCTGGCCGATGACACCGGCGCCTTCTTCGACGCCCTGCAC CACCTGATCCTGCCGGCCATCGTGCTCGGCACCATTCCGCTGGCGGTGATCGCGCGGATGACCCGTTCCTCGATGCTCGAAGTGCTGCGCGAAGACTACA TCCGCACCGCCAAGGCCAAGGGCCTGTCGCCCGCCCGCGTGGTGTTCGTGCACGGCCTGCGCAACGCGCTGATCCCGGTGCTGACCGTGGTCGGCCTGCA AGTCGGCACCCTGCTGGCCGGCGCGGTCCTGACCGAAACCATCTTCTCCTGGCCCGGCATCGGCAAATGGCTGATCGAAGCCATCGGCGCCCGGGACTAC CCCGTGGTGCAGAACGGCATCCTGTTAATCGCCTGCCTGGTGATCCTGGTCAACTTCGTGGTGGACATCCTCTACGGCTTTGCCAACCCACGCATTCGCC ACCAGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGACAATACTCATGAGCACTCCAACCTCCTCAGTAGCCGTATCCGCCGTGGCCGTGGATCAAAGCCTGCTGTACCCGTCGCCGTACAAGGAATTCTGGCA GGCCTTCTCGCGCAACAAGGGCGCGGTGGCCGGCCTGTTGTTCATGCTGCTGGTAATCTTCTGCGCGATCTTCGCGCCCTGGGTCGCCCCGCATAACCCG AGCGAGCAATACCGTGACTTCCTGCTGACCCCGCCGGTCTGGCTCGAAGGCGGCCAATGGCAGTTCATTCTCGGCACCGACGAACTGGGCCGCGACCTGC TGTCGCGCTTGATCACCGGTTCGCGCCTGTCGCTGCTGATCGGCCTGTCGTCGGTGGTCATGTCGCTGATCCCAGGCATCCTCCTGGGCCTGTTCGCCGG CTTCTTCCCACGCCTGCTCGGCCCGACCATCATGCGTCTGATGGACATCATGCTGGCCCTGCCGTCCCTGCTGCTGGCCGTGGCGATCGTCGCCATCCTC
Amino Acid Sequence
>peptide ABC transporter permease
MFSFIARRVGLLIPTFFGITLLTFALIRMIPGDPVEVMMGERRVDPEMHAQAMERLGLNKPLYAQYLDYIGKLAQGDLGESLRTRESVWSEFTSLFPATL ELASAAMLFAAVIGLLAGVIAALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRLDLLYDIEPKTGFMLIDTLLADDTGAFFDALH HLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTAKAKGLSPARVVFVHGLRNALIPVLTVVGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDY PVVQNGILLIACLVILVNFVVDILYGFANPRIRHQR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site