Pseudomonas chlororaphis subsp. aureofaciens 30-84, PCHL3084_RS05080 (dppC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis subsp. aureofaciens 30-84 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCGAGCCGAAAACCGGCTTCATGCTTATCGACACCCTGCTGGCCGATGACACCGGCGCCTTCTTCGACGCCCTGCACCACCTGATCCTGCCGGCCATCG TGCTCGGCACCATTCCGCTGGCGGTGATCGCGCGGATGACCCGTTCCTCGATGCTCGAAGTGCTGCGCGAAGACTACATCCGCACCGCCAAGGCCAAGGG CCTGTCGCCCGCCCGCGTGGTGTTCGTGCACGGCCTGCGCAACGCGCTGATCCCGGTGCTGACCGTGGTCGGCCTGCAAGTCGGCACCCTGCTGGCCGGC GCGGTCCTGACCGAAACCATCTTCTCCTGGCCCGGCATCGGCAAATGGCTGATCGAAGCCATCGGCGCCCGGGACTACCCCGTGGTGCAGAACGGCATCC TGTTAATCGCCTGCCTGGTGATCCTGGTCAACTTCGTGGTGGACATCCTCTACGGCTTTGCCAACCCACGCATTCGCCACCAGCGCTGAGGACAATACTC
DNA Sequence for Gene
>PCHL3084_RS05080 |dppC
ATGAGCACTCCAACCTCCTCAGTAGCCGTATCCGCCGTGGCCGTGGATCAAAGCCTGCTGTACCCGTCGCCGTACAAGGAATTCTGGCAGGCCTTCTCGC GCAACAAGGGCGCGGTGGCCGGCCTGTTGTTCATGCTGCTGGTAATCTTCTGCGCGATCTTCGCGCCCTGGGTCGCCCCGCATAACCCGAGCGAGCAATA CCGTGACTTCCTGCTGACCCCGCCGGTCTGGCTCGAAGGCGGCCAATGGCAGTTCATTCTCGGCACCGACGAACTGGGCCGCGACCTGCTGTCGCGCTTG ATCACCGGTTCGCGCCTGTCGCTGCTGATCGGCCTGTCGTCGGTGGTCATGTCGCTGATCCCAGGCATCCTCCTGGGCCTGTTCGCCGGCTTCTTCCCAC GCCTGCTCGGCCCGACCATCATGCGTCTGATGGACATCATGCTGGCCCTGCCGTCCCTGCTGCTGGCCGTGGCGATCGTCGCCATCCTCGGCCCAGGCCT GATCAACACCGTGATCGCCATCGCCGTGGTGTCCCTGCCGTCCTACGTGCGCCTGACCCGCGCCGCGGTGATGGGCGAGCTCAACCGCGACTACGTGACC GCCGCGCGCCTGGCCGGTGCCGGCCTGCCGCGCCTGATGTTCATCACCGTGCTGCCCAACTGCATGGCGCCGCTGATCGTCCAGGCGACCCTGAGCTTCT CCTCGGCGATTCTCGATGCCGCGGCCCTGGGCTTCCTCGGCCTTGGCGTCCAGCCGCCCACCCCTGAGTGGGGCACCATGCTGGCCTCGGCCCGCGACTA CATCGAACGCGCCTGGTGGGTGGTGAGCCTGCCCGGCCTGACCATTTTGCTCAGCGTGCTGGCAATCAACCTGATGGGCGACGGCCTGCGCGATGCGCTG GACCCGAAACTCAAGAACGCCGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGATTCCCATGTCACTGCTAGAAATCAAGAATCTCAACGTGCGCTTCGGCGACGCCCAGGCCGTTCCCGTGGTGGATGGCCTGGACCTGAACGTGGAC AAGGGCGAAGTCCTGGCCATCGTCGGCGAATCCGGCTCCGGCAAGTCCGTGACCATGATGGCGCTGATGGGGCTGATCGAGCATCCCGGCATCGTCACCG CCGACGCCCTCAGCTTCGACGGCAAGGACATGCTCAAGCTCAGCGCCCGGCAACGCCGGCAGATCGTCGGCAAGGACCTGGCCATGGTGTTCCAGGACCC GATGACCGCGCTGAACCCGAGCTACACCGTGGGCTTCCAGATCGAGGAAGTGCTGCGCCTGCACCTGAAGATGTCCGGCAAGGCGGCCCGCAAGCGCGCC ATCGAACTGCTGGAAAAAGTCGAGATCCCGGGCGCCGCCAGCCGCATGGACGCCTACCCGCACCAACTGTCCGGCGGCATGAGCCAGCGCGTGGCGATTG
Amino Acid Sequence
>peptide ABC transporter
MSTPTSSVAVSAVAVDQSLLYPSPYKEFWQAFSRNKGAVAGLLFMLLVIFCAIFAPWVAPHNPSEQYRDFLLTPPVWLEGGQWQFILGTDELGRDLLSRL ITGSRLSLLIGLSSVVMSLIPGILLGLFAGFFPRLLGPTIMRLMDIMLALPSLLLAVAIVAILGPGLINTVIAIAVVSLPSYVRLTRAAVMGELNRDYVT AARLAGAGLPRLMFITVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDAL DPKLKNAA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site