Pseudomonas chlororaphis subsp. aureofaciens 30-84, PCHL3084_RS00870

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis subsp. aureofaciens 30-84 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCCGCTCACCCGTTGCTGGCGCTGTTGCATGCCGCGCCGCAGACCAGCGAGGGCCTGGTGCAGGCCAGTGGCTGGAGCCTGCCCAGGGTGCTGGCGGCG CTCACCGAACTGGAGCTGGAGGGCCATGCGACGTGCGAAGGCGGTTGCTGGTTTGCCCGGGCAAAAGGCTAAGGCTCTGTACGAAAAGTGGCTGCACGCT GGGCGCCTTCGGCGCTACGCAGGCCATGCTGCGCGCTAGACGCCTGCGGCGTTACGCAGAAACAGGCTCGTGCGCGAGTCCGATCGGAATGCTCATTTAG GCCCCTAAAGTCGAACGCGACCCCGGCCGTTCCTCGCCTGTTTTGATTCGCTGCGCTCACCCTTCGGGCCAGCCCTTGGCTGTTACTCCCGCTGGTCGTT GCGCCTTGCCTGACCTTCGCTCACCGACTTTTCGTACAGACCCTAGGCTTTATAGGCAGGATCGGTAAACTGCGCACAGCCTTAATCCGGAGAGTCAGCA
DNA Sequence for Gene
>PCHL3084_RS00870
ATGGTCAGCAGTTGGCGTGTGCAACAAGCCGCACGAGAAATTCGCGCAGGGGCGGTGATTGCCTATCCAACCGAAGCAGTCTGGGGGTTGGGTTGCGACC CGTGGAACGAAGAGGCGGTGGACCGGTTGCTGGCCATCAAGTCGCGCTCCGTGGACAAGGGCCTGATCCTGATCGCCGACAACATCCGCCAGTTCGATTT TCTCTTCGAGGATTTCCCCCAGGAATGGCTCGATCGCATGGCCAGCACCTGGCCGGGCCCGAACACTTGGCTGGTACCCCATCAGAATCTGTTGCCGGAA TGGGTCACCGGGGTCCACGACACCGTGGCCCTGCGAGTCAGCGATCATCCACTGGTGCGTGAGTTGTGCGCCTTGGTGGGGCCGCTGATTTCCACCTCGG CTAACCCCCAGGGGCGCCCTGCGGCCCGCACGCGGATTCGCGTCGAGCAGTATTTCCGCGGGCAGCTGGACATGGTCCTGGGCGGCAGCCTGGGCGGGCG CAAGAACCCGAGCCTGATCCGCGACCTGGTGACTGGCAAGATCGTGCGTCCGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CACCGCGTCATCGTTTATCGCGGGCAAGCCGGATCGCTGCCCGCGATGCATTTCAAGGCAACAGAATGGTCGAACCCGTGGTGCGTCGCGCCGCCAGTTC GGTCTGCGCCTTCGCCGCTTCCGCCAGCGGATAACGTTGGCCGATCTCGATCTTCAGCTTGCCGCTGGCGATCATGGCGAACAGATCGTCGGCCATGGCC TGCAGGTTCTCGGCGTTGTTGGCGTAGGTGCCCAGGGTCGGACGGGTGACGTACAGCGAGCCCTTGGCCGCCAGGATGCCCAGGTTGACCCCCTCCACCG CGCCCGAGGCGTTGCCGAAGCTGACCATCAGGCCCCGTGGCTGCAGGCAGTCCAGCGAGGTCAGCCAGGTGTCCTTGCCCACGCCGTCGTAGACCACCGG GCATTTCTTGCCGTCGGTCAGCTCCAGCACGCGCTTGGCCACGTCTTCATGGCTGTAGTCGATGGTTTCCCAGGCACCGAGGGATTTTGCCAGCGCGGCT
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MVSSWRVQQAAREIRAGAVIAYPTEAVWGLGCDPWNEEAVDRLLAIKSRSVDKGLILIADNIRQFDFLFEDFPQEWLDRMASTWPGPNTWLVPHQNLLPE WVTGVHDTVALRVSDHPLVRELCALVGPLISTSANPQGRPAARTRIRVEQYFRGQLDMVLGGSLGGRKNPSLIRDLVTGKIVRPA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site