Pseudomonas fluorescens SS101, PflSS101_5329

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens SS101 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTGACCGGTGTGATCCGCATCACCCGCATGCGTGCATAACCGATCCATTACAAGGAGTCATTCATGACCAAGACAGTTATCACCAGCGATAAAGCTCCAG CTGCCATCGGCACTTATTCCCAGGCGATCAAGGCGGGCAACACCGTCTACATGTCCGGCCAGATCCCGCTGGACCCAAAGACCATGGAACTGGTTGAAGG CTTCGAAGCCCAGACCGTACAGGTCTTTGAAAACCTCAAGTCCGTGGCTGAAGCTGCCGGCGGTTCGTTCAAGGACATCGTCAAGCTGAACATCTTCCTC ACTGACCTCAGCCACTTCGCCAAGGTCAACGAGATCATGGGCAAGTACTTCGAACAACCTTACCCAGCCCGCGCCGCCATCGGCGTTGCCGCCTTGCCAA AGGGCGCACAGGTTGAGATGGACGCCATTCTGGTCATCGAGTAAAACACCCGGCGCAGCCCCAACAGGCTTCGCCGACTTCGTTTCAGAAGGATTTCGTA
DNA Sequence for Gene
>PflSS101_5329
ATGCGCAAAGCGCTTGTAGCCTCCTCGTTGCTCGCCCTGTTGCTCGGCGGCTGCGCCAGCAACCCCGCCGACCTGGATGTGAGCGGCACCTGGATCAACC AGGCCGCCATCGACGCGGCAGCCAAGGGCGGCCCTTTGCGTGAAGCCCTGCAATCCTATGGCCCCAACCTTGAGTGGGAGGTCAACACCAAGGCCTTGCA GGCGCGCTACTACAACGGTTTTGAAGTGGCGGAAGGCAAGTTGTCGGGTGAAAAACCCGGCGCGTGGAACGTGGACTTCTATGGCAGCTCTGCCACCGAA CTCAAACGCAAAGGCAAGCAACTGCTGCAAGTGGCCAACGACAATGAGCCCGAGCAGCTGTTTGCCCGCGCCAAAGACCCGGCCCCAGAAGGCGCGCCAC TGGGCGCCAACTTCGAACGCGCACTTTACGCGGCCTACATGGGCGGCGACTGGAAGATCAGCGACGGCACCGGCAGCGGCGCCACGGTGCAGTTCCAGGC TGACGGCAAGGTCGCCGGCCTGCCGGGGGTTGATCGTTATTCACTCTGCCTGGCAGGCGACTGCGCCTCCATGAGCGGCGGCTATGACAGCATCTGGCTG CAACTGAACGGCCAGGGCAACCCTTGGATCTTCGCGCGCAAGGGTGAGCAACTGGAGATCTTCCAGGCGATCAATACCGCGCAGGCCGATGAAGTGCCTT CGTTTACGCCAGGCCCGCGCCAATGGCTGCTTGAAAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAAAAGCCTCACCTGAATCAAAATGTGGGGGCTGGCTTGCTTGCGATGACCATAGATATCTACACAACTCTACACAACTCTGTAGCGTTCAACGGTAACC ACGATGCGAAGCGAGCCGCTCTTGATCTGCTTTTGATTTCAGGCGCCCCGTTAAACCACGCTGGCCGGAATTCGACAGGGATTTGGGGGGTAAACCGGCA GGGATGCCGGTTTAGCCGCCCCGCGCCATGGATGGCGCGTGGCGGCGGCCCCCCAAATCACTGGCGGATTACGGGCACACCGAGCCTAAGCGAGGTGCCG AGTGGTGGGGCGAGGACCTTTTGGTTACTTTTGGGTCCTTCCAAAAGTGACCCGCTGTCAGAGCGGAACCCTAAGCGGCCGTTACCGCAGGATTGGATAT GTACACGCTCCAACTATATTGACTGTTAGGCCGCCTTCGCAGGCAAGCCAGCTCCCACATTTTTTACCGCGTTTCAGCCATTCAAAATCGCCGCATAGCC
Amino Acid Sequence
>hypothetical protein
MRKALVASSLLALLLGGCASNPADLDVSGTWINQAAIDAAAKGGPLREALQSYGPNLEWEVNTKALQARYYNGFEVAEGKLSGEKPGAWNVDFYGSSATE LKRKGKQLLQVANDNEPEQLFARAKDPAPEGAPLGANFERALYAAYMGGDWKISDGTGSGATVQFQADGKVAGLPGVDRYSLCLAGDCASMSGGYDSIWL QLNGQGNPWIFARKGEQLEIFQAINTAQADEVPSFTPGPRQWLLEK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site