Pseudomonas fluorescens SS101, PflSS101_5111

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens SS101 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTGAGGTCGTCAATCATCGCCGCCAGGGTCGTGGACTTGCCCGAGCCGGTGGGCCCGGTCACCAGCACCAGCCCGCGAGGGAAGCGGGCGATACGCTGGA ACACCTCGCCCAACCTCAGGTCTTCCAGGCTCTGGACCTCAGCCGGAATAGCCCGAAACACCGCACCCACGCCGCGATCCTGGCGGAACACGTTCGCCCG GAACCGGGCGACGCCTGGCAACTCGAAGGCAAAATCCGTTTCAAGAGATGTTTCGAAATCCTTTTGTTGATGTTTATTCAGCAAAGGGCTCAATAAGTCG ACCACTTGGGTAGCGTTCAGCGCCGGCCCATCCAGGGGCCAAACCTCGCCATCAATGCGCAGCATGGGTGCCAGGCCGGCTGACAGATGCAGGTCTGAGG CGCCTCGGCTTACGCTGGCCGTCAGCAATTGCGTGATATCCATAGGGCTTTCCATTTCCAGTAGAATGCCGCGGACTCCATATCCACGGGCGCATCTTGA
DNA Sequence for Gene
>PflSS101_5111
ATGTCGACGATAGCAGACAACATCGGCCTGGTTAGCCAGCGCATCCGCGCCGCAGCCGACGCCGTGCAACGTGACGCAAGCAGCATCCACCTGCTGGCCG TGAGCAAGACCAAACCGGCGCAGGCAGTGCGCGAAGCCTATGCCGCCGGGCTGCGCGACTTTGGTGAAAACTACCTGCAGGAAGCCCTGGGCAAACAGGC GGAATTAACCGACCTGCCCTTGAGTTGGCACTTCATCGGCCCCATTCAATCGAACAAGACTCGTGCCATCGCCGAGCACTTCGCTTGGGTGCACTCCGTG GACCGCCTGAAAATCGCACAACGCCTGTCCGAACAACGCCCGGCCGACCTGCCGCCGCTCAATATCTGCATCCAGGTCAATGTCAGTGGCGAAGCCAGCA AGTCCGGCTGCACGCCCGCTGACCTGCCGGCCCTGGCCACAGCGATCAGCGCCCTGCCGCGCTTGAAGCTGCGGGGCTTGATGGCGATTCCCGAGCCGAC GCAAGACCGGGCGGAGCAGGATGCGGCGTTCGCCACGGTGCGCGACTTGCAAGCCAGCTTGAACCTGGCGCTGGACACACTTTCCATGGGCATGAGCCAC GACCTTGAGTCGGCCATTGCCCAAGGCGCCACCTGGGTGCGGATCGGTACCGCCCTGTTTGGCGCCCGCGACTACGGCCAGCCGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AATGGCTGACATCCCTCGAAATAAGGACCTGTCATGAGCAACACGCGTATTGCCTTTATCGGCGCCGGTAACATGGCGGCCAGCCTGATCGGTGGCCTGC GGGCCAAGGGCCTGGACGCCGAGCAGATCCGCGCCAGCGACCCCGGTGCCGAAACCCGCGAGCGCGTCAGCGCCGAACACGGTATCCAGACCTTCGCCGA TAACGCCGAGGCCATCCACGGCGTCGATGTGATCGTGCTGGCGGTCAAGCCCCAGGCCATGAAGGCCGTGTGCGAGAGCCTGAGCCCGAGCCTGCAACCC CATCAACTGGTGGTGTCGATTGCCGCTGGCATCACCTGCGCCAGCATGACCAACTGGCTCGGTGCCCAGCCCATTGTGCGCTGCATGCCCAACACCCCGG CGCTGCTGCGCCAGGGCGTCAGCGGTTTGTATGCCACTGGCGAAGTCACCGCGCAGCAACGTGACCAGGCCCAGGAACTGCTGTCTGCGGTGGGCATCGC
Amino Acid Sequence
>hypothetical protein
MSTIADNIGLVSQRIRAAADAVQRDASSIHLLAVSKTKPAQAVREAYAAGLRDFGENYLQEALGKQAELTDLPLSWHFIGPIQSNKTRAIAEHFAWVHSV DRLKIAQRLSEQRPADLPPLNICIQVNVSGEASKSGCTPADLPALATAISALPRLKLRGLMAIPEPTQDRAEQDAAFATVRDLQASLNLALDTLSMGMSH DLESAIAQGATWVRIGTALFGARDYGQP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site