Pseudomonas fluorescens SS101, PflSS101_4162

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens SS101 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AAAAATTGAGACTGTGCGCATGATTCAGCTCCTACCTATGCCTGACATATGCAATGTAGAGATACGTGGAAGCCTATGCAAGACATATGGCAATTTGCCG ACGATCGGAGATCGTGTGCCAGTTGCTAAAAAACTTGCGGCAGTAACCCCCCGTAAACTCTCACCCCGGCTTCAAAAGCGTCCTTTTTGTCTCTAATCAG TGACCATCCGTCACAACACAAACCCGATTTTTTCCCTATAATGCGCGGGTAAATCGGGCCTGCAATATCCCTTTACACTGGGATGAAGAGCCAGACCTGA GGCATCCCGCGCGAGCTTGCACCTACCGCTGCGCCCCTCAAGCCTCACGCAGAGCACCCGTAGCCCTATTCCGTTTAATGCGTGCGCTAGCTGCAACAAA CGATTCCTTAAGATCCACCGCGGCCCTAGGGCCGTGTGAACACCCAACCATCCGGTTTCACACGGGCACCTTTGAGCCCTCACGCAGGAGACGACACGTC
DNA Sequence for Gene
>PflSS101_4162
ATGCTGAGCTGGGACGAATTCGACAAAGAAGAAGAAGGCGAAATAGCCGCTAAAGGCGCCAACGCCGGCCACGCCACCGAAGCCAACATGGACCGCCTCG ACGGTGCCGGCGCCGCTGCCGCCGTGGAAGCCCGCGCCGTCACCGCCAATGACTCCGCCGCCATCGTGCGCGCCAAGGCCGCCCTGGACAAACTCGACGT CGCCGAAGGCCTCGCCGAGCTGGAAGGCGCCTCCGCCCGCGTCGCCGTTGACGAAAAGCGCATGATCAACTGCCGCGCCGACCTCAACCAACTTGTGCCC TTCAAGTACGACTGGGCCTGGCAGAAGTACCTCGACGGCTGCGCCAACCACTGGATGCCGCAAGAGGTCAACATGACCGCCGACATCGCGCTGTGGAAAA ACCCCGAAGGCCTGACCGACGACGAACGCCGCATCGTCATGCGCAACCTGGGCTTCTTCTCCACCGCCGACTCCCTGGTGGCCAACAACCTGGTACTGGC CGTGTACCGCCTGATCACCAACCCGGAGTGCCGCCAGTACATCCTGCGCCAGGCCTTCGAAGAAGCGATCCACACCCACGCCTACCAGTACTGCATCGAA TCGCTGGCCATGGATGAAGGCGAGATCTTCAACATGTACCACGAGATTCCATCGGTGGCCAAAAAGGCCGCCTGGGGCCTGAAATACACCCGCTCGATCT CCGATCCAAAGTTCGAAACCGGCACCGTCGACACCGACAAAGAACTGCTGCGCAACCTGGTCGCCTACTACTGCGTACTGGAAGGCATCTTCTTCTACTG CGGCTTCACCCAGATTTTGTCCATGGGCCGCCGCAACAAAATGACCGGCGTGGCCGAACAGTTCCAGTACATCCTGCGCGATGAGTCGATGCACCTGAAC TTCGGTATCGACGTGATCAACCAGATCAAAATCGAAAACCCGCACTTGTGGGATGCCGAGATGAAGGAAGAAGCGACCCAGATGATTCTGCAGGGTACGC AGCTGGAGATCGAATATGCGCGCGACACCATGCCTCGTGGGGTTTTGGGGATGAATGCGGCGATGATGGAAGACTATCTGAAGTTTATCGCTAACCGTCG TTTGACGCAGATTGGTTTGAAGGAAGAGTACCCAGGCACCACCAACCCGTTCCCGTGGATGAGCGAGATCATGGACTTGAAGAAAGAGAAAAACTTCTTC GAAACCCGTGTAATCGAGTACCAGACCGGCGGCGCGCTGAGCTGGGATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCGGACTAAGCACTAAAGGAAGCCCTGGCATGTTCAGGGCTTTTTTTCGTCGGTAAAAAAGGAATTTGCCATTTCTTGAAGTACATCACCTCAAGCACC TGGCCCGGAAGGGTTCGGATCGCCCCCCCAATGCTGTAGCCTTGTGCCCCAATTGCCATCAGCGTTGTCACAGGTCAAGTGCTCGGGAAGCTCTTACCGA AGCGCTTTACGCCAAGATCGGAAGATTGGCACGGGAGCAGACTCCTGCTGTCACAGCTGATGCCCGCTTAAAAACTATTAGATAGGACCGAGGCCAACCC GTGAACCCAGACATGCTCGAAGCCGGCCCCGCAGACGCCAAAGTACTTTCCGTCTTTGACTTCGACGGCACCCTCACCCACCACGACAGTTTCGTGCCCT TCCTCAAGTTTGCCTTTGGCACCGGTGAGTTTTATGGCCGGATGGTCAAGCTGGCGGTGCCGGGGCTGCGGTTTTTGGTGCGGCAGATCAGCCGGGATGA
Amino Acid Sequence
>ribonucleotide-diphosphate reductase subunit beta
MLSWDEFDKEEEGEIAAKGANAGHATEANMDRLDGAGAAAAVEARAVTANDSAAIVRAKAALDKLDVAEGLAELEGASARVAVDEKRMINCRADLNQLVP FKYDWAWQKYLDGCANHWMPQEVNMTADIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIE SLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVDTDKELLRNLVAYYCVLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLN FGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF ETRVIEYQTGGALSWD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site