Pseudomonas fluorescens SS101, PflSS101_3887 (ccoO_2)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens SS101 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTGGCGTTCTACGGCATGTCGACCTTCGAAGGGCCGATGATGGCGATCAAGACCGTCAACTCGCTGTCCCACTATACCGACTGGACCATCGGCCACGTGC ACGCTGGCGCTCTCGGTTGGGTGGCGATGATCTCCATCGGCGCGCTGTACCACATGATCCCCAAACTGTTCGGCCGCGCGCAGATGCACAGCGTCGGGCT GATCAATGCGCACTTCTGGCTGGCCACTATCGGCACCGTGCTCTACATCGCCTCGATGTGGGTCAACGGCATCACCCAGGGCTTGATGTGGCGTGCGATC AACGATGACGGCACCCTCACCTACTCCTTCGTCGAAGCGCTGCAAGCCAGCCACCCGGGCTTTATCGTACGTGCCCTGGGCGGTGCGTTCTTTGCCAGCG GCATGCTGTTGATGGCCTACAACGTGTGGCGCACCGTGCGTGCCAGCGACCCTGTTGAAGCCGAAGCCGCCACCAAGATCGCCGTTGTGGGAGCTCACTG
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| DNA Sequence for Gene |
>PflSS101_3887
|ccoO_2
ATGAAGCATGAAGTAGTCGAGAAGAACATCGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCATTGGCGGCCTGACCCAAATCGTCCCGCTGTTTT TCCAGGACGTGACCAACAAGCCGGTCGAAGGCATGAAGCCACGCACCGCCCTTGAACTGGAAGGCCGCGATGTCTACATCGCCAACGGTTGCGTGGGCTG CCACTCGCAGATGATCCGCCCCTTCCGCGCCGAAACCGAACGCTACGGCCACTACTCGGTTGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGT TCCAAGCGCACCGGCCCGGACCTGGCCCGTGTGGGTGGGCGCTACTCCGATGACTGGCAGCGTGCGCACCTGTACAACCCGCGCAACGTCGTGCCGGAGT CGAAAATGCCGGCGTACCCGTTCCTCGTGGAAAACAAGCTCGACGGCAAGGACACCGCCAAGAAGATGGAAGTCTTGCGCACCCTGGGCGTGCCCTACAC CGACGAAGACATCGCCGGTGCGGCCGCCGCCGTGAAGGGCAAGACCGAAATGGACGCATTGGTGGCCTACCTGCAAGGCCTTGGCACCATCATCAAAAGC AAACGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTTCATGGATATCGGGATGATTCGTGGCTTGGGCACCGTTGTGGTGATGGTGGCCTTTATCGGCCTGGCGTTGTGGGTGTTCAGCCCACGGCGCAAGTC GGAGTTTGACGACGCGACCATGCTGCCCTTCGCAGATGACCCCGAAGCCATCAAGCACGTCGAGCAAGCTTCTAGGAGTAACAAAGAATGACTACGTTCT GGAGTCTGTACGTCACAGTCCTCAGTCTGGGTACCATCTTCGCCCTGACCTGGCTGCTGCTGTCGACCCGCAAGGGCCAGCGCACCGAGCAGACGGACGA GACCGTCGGCCACTCGTTCGACGGCATCGAGGAGTACGACAACCCGCTGCCCAAGTGGTGGTTCATGCTGTTTGTCGGCACAATCGTCTTCGCCCTTGGT TACCTGGTGCTCTACCCTGGCCTGGGCAACTGGAAGGGCCTGCTGCCAGGCTACAACTACCTCGACAACGACAAGCAAACCCCCTTCGCCAACGGCCAGA
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| Amino Acid Sequence |
>peptidase S41
MKHEVVEKNIGLLAFFMVIAVSIGGLTQIVPLFFQDVTNKPVEGMKPRTALELEGRDVYIANGCVGCHSQMIRPFRAETERYGHYSVAGESVWDHPFLWG SKRTGPDLARVGGRYSDDWQRAHLYNPRNVVPESKMPAYPFLVENKLDGKDTAKKMEVLRTLGVPYTDEDIAGAAAAVKGKTEMDALVAYLQGLGTIIKS KR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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