Pseudomonas fluorescens SS101, PflSS101_3755 (fliO)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens SS101 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCATGATTGTTTGCTGCGCCGAGGACATGTAATGGCTACCGAACACGAAAACACTTCCGCCGAAGACCAGGCCCTGGCTGACGAGTGGGCTGCGGCCCTG GAAGAAACCGGCGATGTAGGCCAGGACGACATCGACGCGCTGCTGGCCGCCGACGCCGCCACCGCGCCGGCCGGCAACCGCCTGGCCATGGAAGAATTCG GCAGCGTGCCGAAGAACAACGACCCGGTGAGCCTCGACGGCCCGAACCTGGATGTGATCCTCGACATCCCGGTGTCGATTTCCATGGAAGTGGGCAGCAC CGAAATCAACATCCGCAACCTGTTGCAGCTCAACCAGGGCTCGGTGATCGAGCTGGACCGCCTGGCCGGCGAGCCGTTGGACGTGCTGGTCAACGGCACC CTGATTGCCCATGGCGAGGTGGTGGTGGTCAACGAGAAGTTCGGCATCCGCCTGACCGACGTGATCAGCCCGAGCGAACGCATCAAGAAGTTGCGCTGAG
DNA Sequence for Gene
>PflSS101_3755 |fliO
ATGAAGTACTCGATGGCGGGACTGTTGCTGGCGCTGCCATTGAGCGCCCTGGCGGCGGAGCCGGTGGCGCAGGTGGCTACGGCGCCAGCGGTCGGCAGCG TCGGCGGGCAGTTGACGCAACTGGTGCTGGGCCTGTTGCTGGTGATCGGCCTGATCTTCGTGCTGGCCTGGTTGATGCGCCGCGTGCAGCGCATCGGCCC GGGCAACGGCCAGGTGATAGAGCTGGTGGGCTCGCGCGCCCTCGGACCGCGTGATCGGCTGGTGCTGGTGCAGGTGGGCGAAGAGCAGATCCTGCTCGGC ATCACCCCCGGCCGCATCACCCCGCTGCATGTACTCAAGACCCCGGTGGACGCGGTCAAGACCGAAGCCGCCACGCCAGAATTCGCCCAGCGCCTGATGG AGTTGCTGGGCAAGGATCAGAAGGATAAGAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCGCGTTTTGTTGACGCTCATGCTGTTGCTGGCCGCGCCGATGGCCCTGGGCGCCGACCCGTTGTCGATCCCGGCGATCACCCTGGGCACCAATGCGGC GGGCGCGCAGGAATATTCGGTCAGCCTGCAGATCCTGCTGATCATGACGGCGCTGAGTTTTATCCCGGCGTTCGTCATGCTGATGACCAGCTTTACGCGG ATCATCATCGTCTTCTCGATCCTGCGCCAGGCCCTGGGCCTGCAGCAGACGCCGTCGAACCAGATCCTCACCGGCATGGCGCTGTTTTTGACGCTGTTCA TCATGGCGCCGGTGTTCGACAAGGTGAACCAGCAAGCCCTGCAACCTTATCTGGCAGAAAAGCTCACGGCCCAGGATGCCATCGACAAGGCTCAGGGCCC GATCAAGGACTTCATGCTGTCGCAAACCCGCTCCAGCGACCTCGAGCTGTTCATGCGCCTGTCCAAGCGCACCGACATCGCCACCCCGGACCAGGCGCCG
Amino Acid Sequence
>flagellar assembly protein FliO
MKYSMAGLLLALPLSALAAEPVAQVATAPAVGSVGGQLTQLVLGLLLVIGLIFVLAWLMRRVQRIGPGNGQVIELVGSRALGPRDRLVLVQVGEEQILLG ITPGRITPLHVLKTPVDAVKTEAATPEFAQRLMELLGKDQKDKK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site