Pseudomonas fluorescens SS101, PflSS101_3705

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens SS101 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCGGTGGTGCCGGCGGGGATCTTTACTTCCAGGCCCTGGCGATACACTTGCTGCTCGCCAAAGAACTCGTCGCTATGGGCTTCACCCTCGGGCAGCAC GGGTTTTTCGGCCAGGCCGTCGAACTTCATGCGCTGCTGGTACAGGTAGTAACCGTCGGCAATCTGCCAGAACAGCTGGGTTTCGCCGCTTTCAAGACGT TCGGAGGTAAAGGCGAAGGCTTTGCCCACCGGGAGGAAGTCGGGTTTGGTTTCGAAGGGGCTGCCCGGCGCTGCCTGGGCGAATCCCGCGAACAACACCA GCAGAAAGGTAAACAGATGCCGCATGGTCAAGCCTTAGTTCGATGCAAGTGAGGCACACAATGTGTGGCGTTGATTAACCGATGATTAACCACCGCTATT CTAGAGTGTAGGGATTGTCCGGTGTTGCGAACTTTAGCGGCATAATGCGCGCTTAATCCGTGGCTTTTCTAATCGCGCCATCTTTCATGAAGGGTTAATC
DNA Sequence for Gene
>PflSS101_3705
ATGCACGTACTGGTCTGTGAAGACGACGAACTGATCGCCAGTGGCATCGTAGCCGGCCTGACCGCCCAGGGCTTTACCGTGGAGCGCGTGGCCACGGCCT CGGCTGCGCGGGCGATGCTCAAGGCCGCCGCCTTCGACATCATGGTGCTCGACCTTGGCTTGCCCGACGAAGACGGCCTCAAGCTGCTGCAACAACAGCG CAGCCAGGGGTTGGAGATTCCGGTGCTGATCCTCACCGCGCGGGATTCGGTGACCAATCGCGTCGACGGCCTGCAAGCCGGCGCCGACGACTACCTGCTC AAGCCCTTCGACCTGCGTGAACTCGCCGCGCGCCTGCAAACCCTGCTGCGCCGGGTGGCAGGCCGTAGCGTCAACCTGATCGAACATGGCCGCCTGGCCT ACGACCCCAGCAGCCGCGAGACCTTCCTCGGCGGCCAGCCAGTGGACCTGTCCCGGCGCGAACAGGCGTTGTTGCAGGCGTTGCTGCACAACAAGGGCCG CGTTCTGTCCAGCGAACAGCTCAAGGACAGCGTCTACGGCTTCAGTGACGAACTGGAAAGCAACGCGCTCAACGTGCACATCCACCACTTGCGACGCAAG TTGGGCAACGGCATCGTCGAAACCGTCAGAGGGCTGGGCTATCGCCTGGGCACGGCTGACGGGGGAGACAACACGCCGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGAGCTTGCGTCTGCGCCTGACGTTCAAGCTGGGCGCCGCTTTTGTGCTGATCTGGGTGCTGGCGGCCGCCTGGATGCTCAACGATTTGCGCAACCAGAT GATGTTTTCCCTCGACCAGCGCCTGGTGGCTTCGGCGCGCATGGTGGCCGGGCTCACCGAGCAGATGCCGGGCCTGGCCAGCGTCAGCGGTGGCGCGCAT TTGCGCACCGAACAACTGAATGTGCCGGGCGGCATGGCCTGCCAGGTCAGTTCCTTGCGCGGCGAGATCCTGGCGCGTAGCCATACCACGCCGGAGGAAG GGCTGGAGTCGCGCCGCAGCGGTTTTCGCGACCAGATCATCGACGGTGTGGGCTGGCGCAGTTTTACCCTGTCCCGTGGCGATTTGCTGATCACCACCGC CGACCGCCAGGTGGAGCGCGAAGCCCTCAACCTGTCGATCCTGCTGGCGGCGTCGGTGCCGGTCGGCGTGGCGTTGCTGGGCTGCCTGTGCCTGCTGTGG
Amino Acid Sequence
>transcriptional regulator
MHVLVCEDDELIASGIVAGLTAQGFTVERVATASAARAMLKAAAFDIMVLDLGLPDEDGLKLLQQQRSQGLEIPVLILTARDSVTNRVDGLQAGADDYLL KPFDLRELAARLQTLLRRVAGRSVNLIEHGRLAYDPSSRETFLGGQPVDLSRREQALLQALLHNKGRVLSSEQLKDSVYGFSDELESNALNVHIHHLRRK LGNGIVETVRGLGYRLGTADGGDNTP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site