Pseudomonas fluorescens SS101, PflSS101_2911 (mexQ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens SS101 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGCTGGCCGCGACGCGGCAGCATGCCGGGTCCAAGGGTGAACAAGCCGCCAAGGTCATGGTGGCAATGCTCAATGACACCACCTATGCACGCGCCGGGC GCGTGGACTTTCTGGCCAACTCGGCCGACCGCAAGACCGGCACCGTGCGCGTGCGTGCGGTGGTGGCGAACCCGGATGGACGCTTGACGCCGGGGCTGTT CGCCAAGGTCAAGCTGGATACCGGCGCGGCGCAACCCCGGGTGTTGATTGCCGACCATTCCATCGGCACCGACCAGGGCCGCCGTTATGTGCTGGTAGTG GGTGAGGGTGACAAGACCGAATACCGCCCGGTCGAACTGGGCCCGGTGGTCGACGGCCTGCGGGTCATCGAACAGGGCCTGCAACCGGGCGAGCGCATTG TCGTCAAAGGCCTGGTGCGGCCGGGCATGCAGGTAACACCACTGGCCGCCAGCATCGAGGGCAAGCCGCTTGAGGCGCCGCTGGCGGTGGGGGGCGAGCA
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| DNA Sequence for Gene |
>PflSS101_2911
|mexQ
ATGAGCTTCCCACGCTTTTTCATCGACCGACCGATATTCGCCATCGTCCTCTCGGTGTTGATGATGATCGGCGGCATCGTGGCCTTCTTCCATTTGCCGT TGAGCGAATACCCCGCCGTCACGCCGCCCACGGTGCAAGTGACTGCGTCGTATCCGGGGGCCAACCCGCAGGTAATTGCCGAGACAGTGGCAGCGCCGCT GGAACAGGTGATCACCGGGGTCGAGGGCATGCTTTACATGACCTCGCAGTCGGCCACCGACGGCCGCATGATCCTGACCGCGACCTTCGCCCAGGGCACC AACGCGGATATGGCCCAGATCCAGGTGCAGAACCGTGTGTCGCGGGCTTTGCCGCGCTTGCCCGAAGAGGTGCAGCGCCTGGGCGTGGTCACGCAGAAAA CCTCGCCGGACATCCTCATGGTGGTCCACCTGCTGTCCCCGGACCAACGTTATGACCCGCTCTACATCTCCAACTATGCCTACCTGCAGGTGCGCGATGA GTTGTCGCGGCTGCCGGGGATCAACGATGTGCTGGTGTGGGGCGCGGGTGAATACAGCATGCGCCTGTGGCTCGACCCGGACCTGATCGCCGCCCGTGGC TTGACCGCCGGCGATGTGATTGGCGCCGTGCGCGAGCAGAACGTGCAAGTGGCGGCGGGCTCGGTCGGCCAGTCGCCGGATTCCACTGCGGCCTTTCAGG TCACGGTCAATACCCTGGGGCGCTTGACGGACGAAGAGCAGTTTGGCGACATCATCATTCGCACCGGCGATAACGGTCAGGTCACGCGTTTGCGCGATGT GGCCCGTATCGAGATGGGCGCCGATGCCTACGCGCTGCGCAGCCTGTTGGACGGCGAGCCGGCGGTGGCCTTGCAGATCATCCAGAGCCCTGGGGCCAAC GCCCTCGATGTGGCGCAGTCGGTGCGCGACACCATGCAGCGCCTGCAGGCCAACTTCCCGGAAGGGCTGGTGTCGCGGATTGCCTACGACCCCACCGTGT TTGTGCGCGCTTCGCTGGAGTCGGTGGCCATCACGCTGATGGAAGCGATCCTGTTGGTGGTGATTGTGGTGGTGGTGTTCCTGCGCAACTGGCGCGCGTC GCTGATCCCCTTGATGGCCGTGCCGGTGTCGATCATCGGCACCTTCGCGGTCATGCACCTGATGGGCTTCTCCCTCAACACCTTGTCGCTGTTCGGCCTG GTGCTGTCGATTGGCATCGTGGTCGACGATGCCATCGTGGTGGTCGAGAACGTCGAGCGGCATATCGAGAACGGCGAGGAGCCGATGCAAGCTGCACGAC GGGCCATGGGCGAGGTCACCGGCCCTATCATTGCGATCACCTCGGTGCTGGCGGCCGTGTTCATTCCCACCGCGTTTCTCAGCGGCCTGCAAGGCGAGTT CTATCGGCAGTTTGCGCTGACCATCGCGATTTCCACCATCCTCTCGGCGGTCAACTCGTTAACCCTCAGCCCGGCGCTGGCCGGCCTGTTGTTGCGGCCG CGGCATGCCGTCGTGGCGCCCGACCCGCGTAGCCTGCGCGGTCGCGCCACGCGGCTGCTGGAGGTACTGGGCCGGCCGTTCCAGCGTGCGCCGCAAGCCT ATGGCAACACCGTGCGCAAGGTTGTCGGCCGCCGCGGCGTGGCGCTGTTGGCCTACGGCGGCTTGCTGGCGTTGACCTGGTTTGGGTTCAACGCGGTACC GGCCGGCTTCGTGCCGATGCAAGACAAATACTATCTGGTCGGCATCGCCCAACTGCCGAACGCGGCCTCGTTGGAGCGTACCGATGCGGTGGTGCGGCAA ATGTCGAAAATCGCCCTGGATGAACCGGGGGTCGAGAGTGTGGTGGCGTTCCCGGGGCTGTCGGTCAACGGTTTCGTCAACGTCCCGAATGCGGCGGTAA TGTTCGTCATGCTTGATCCGTTCAAGGAGCGCACCTCGCCGGATATGGCAGCGGTCGCCATCGCCGGGCGCCTGCAAGCCAAGTTTGCGAGCATCCCCGA CGGCTTCCTCGGCGTATTCCCACCGCCGCCGGTACCGGGGCTCGGGGTGACCGGGGGCTTCAAGCTGCAGGTCGAAGACCGTGGCGGCGTCGGGCTTGAG GCGTTGGTGCAGCAGACCCAAATGCTGATGACCAAAGCCACTGAGTCAGGCCAGGTGGCCGGGTTGATGACCAGCCTGGACGTCAACGCGCCGCAACTGA ATGTCGACATCGACCGCACCCAGGTCAAGAGCCAGGGCGTGCGCCTGGCGGATGTGTTCGAGTCGCTGCAGGTCTACCTGGGGTCGCTGTATGTCAACGA CTTCAACCGGTTTGGCCGCACCTACAAAGTCACGGCACAGGCCGATGCAGACCACCGCATGCAGGCCGAAGCCATCGGCCGTCTGCAGGTGCGCAATGCC GCCGGCGACATGCTGCCGTTGTCGGCATTTGTCACGGTCACGCCGAGCTCCGGGCCTGACCGGGTGATTCACTACAACGGCTATCCGTCGGCGGATATCT CTGGCGGCGCGATGCCAGGGGTCAGCTCGGGGCAGGCGGTTGCGCTTATGGAACGCTTGGCCCAGGAGGTACTGCCCGAGGGCGTGACCTATGAATGGAC AGACCTGACCTACCAGCAAAAACTTGCCGGGTCATCGGCCCTGTTTATTTTCCCGCTGTGTGTGTTGCTGGCGTATCTGATCCTCGCCGCGCAGTACAAC AGTTGGCTGCTGCCGTTGGCGGTGTTGCTGATCGTGCCCATGTGCCTGCTCAGCGCAATCCTCGGCGTGTGGCTGGTGGACGGCGACAACAACGTGTTCG TGCAGATCGGGTTGGTGGTGCTGGTGGGCCTGGCGGCGAAGAACGCCATCCTGATTGTCGAGTTTGCCCGCAGCCTCGAAGCCGAAGGCGCCAGCCCCTT GGAAGCGGTGATCCACGCGTGTCAGTTGCGCCTGCGGCCTATTTTGATGACGTCTCTGGCGTTCATCGCCGGCGTGGTGCCGCTGGTGTTTGCCAGTGGC GCCGGTGCCGAGATGCGCCATGCCATGGGGGTTGCGGTGTTTGCCGGGATGTTGGGCGTGACGCTGTTCGGCCTGTTCCTGACGCCGGTGTTCTATGTGG TGATGCGCAGCCTGGCGCTGCGCGTGGAGCGCCAGGGGGCGAGCCCTAAGGTGCAGCTAAAGGAGAGCGCATCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACAGGCGTATCCAGCTTTTGTGTTGTCGTTGACCCTGCTGGCCGGTTGCGGTTCGGTGGGGCCGGACTATTCCGCGCCGGTGCTGCCCGCTGCGCAACG GGCGACGAGCTTTGGCGCGCCCATCGCCGGGCTTGGTCCGGGCGAGGTGGAGGTGCAGTGGTGGCAGGTGTTTGATGAGCCGGCACTTAGCCAATTGATC CAGCAGGCACTGGCGGCCAACCACGACATCGGCATCGCCGCCGCACGCCTGGACGAAGCCAAGGCGCTGCTGCGTGAAAGCCGCCAAGGCTTCCTGCCTA GCGGCGGCGCCGCCCTGGGCTACGAGCATCGCAAGCGCAGCGAGGTCCAGACCCCGTTCGGCGAGCAGCGCTCCATTGAAACCACCCGCGCGGCGGTGGA TGCGGCCTGGGAAATCGACTTGTTTGGCCGCGTGCGTCGCTCGGTGGAGGCGGCCCAGGCCCAGGCGGGGTCGCGTCAGGCGTTATTGCGCAACGTGCAA
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| Amino Acid Sequence |
>transporter
MSFPRFFIDRPIFAIVLSVLMMIGGIVAFFHLPLSEYPAVTPPTVQVTASYPGANPQVIAETVAAPLEQVITGVEGMLYMTSQSATDGRMILTATFAQGT NADMAQIQVQNRVSRALPRLPEEVQRLGVVTQKTSPDILMVVHLLSPDQRYDPLYISNYAYLQVRDELSRLPGINDVLVWGAGEYSMRLWLDPDLIAARG LTAGDVIGAVREQNVQVAAGSVGQSPDSTAAFQVTVNTLGRLTDEEQFGDIIIRTGDNGQVTRLRDVARIEMGADAYALRSLLDGEPAVALQIIQSPGAN ALDVAQSVRDTMQRLQANFPEGLVSRIAYDPTVFVRASLESVAITLMEAILLVVIVVVVFLRNWRASLIPLMAVPVSIIGTFAVMHLMGFSLNTLSLFGL VLSIGIVVDDAIVVVENVERHIENGEEPMQAARRAMGEVTGPIIAITSVLAAVFIPTAFLSGLQGEFYRQFALTIAISTILSAVNSLTLSPALAGLLLRP RHAVVAPDPRSLRGRATRLLEVLGRPFQRAPQAYGNTVRKVVGRRGVALLAYGGLLALTWFGFNAVPAGFVPMQDKYYLVGIAQLPNAASLERTDAVVRQ MSKIALDEPGVESVVAFPGLSVNGFVNVPNAAVMFVMLDPFKERTSPDMAAVAIAGRLQAKFASIPDGFLGVFPPPPVPGLGVTGGFKLQVEDRGGVGLE ALVQQTQMLMTKATESGQVAGLMTSLDVNAPQLNVDIDRTQVKSQGVRLADVFESLQVYLGSLYVNDFNRFGRTYKVTAQADADHRMQAEAIGRLQVRNA AGDMLPLSAFVTVTPSSGPDRVIHYNGYPSADISGGAMPGVSSGQAVALMERLAQEVLPEGVTYEWTDLTYQQKLAGSSALFIFPLCVLLAYLILAAQYN SWLLPLAVLLIVPMCLLSAILGVWLVDGDNNVFVQIGLVVLVGLAAKNAILIVEFARSLEAEGASPLEAVIHACQLRLRPILMTSLAFIAGVVPLVFASG AGAEMRHAMGVAVFAGMLGVTLFGLFLTPVFYVVMRSLALRVERQGASPKVQLKESAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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