Pseudomonas fluorescens SS101, PflSS101_2433

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens SS101 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAACGGCCGATGGTGTCGCTGGATGTGACCAAGGACCGTGGTATGTTCCGCGAAAACAGCCAGGGCTTGATCGAGAACATCTACAGCCTCAAGGTGATCA ACAAGACCCAGCAGCGCCAGGACTACCGCCTGGAACTGGTGGACGCCGAGGGCTTCCAGTTGCAAGGCAAGACCCAGGTCAGCCTGGCGCCCGGGGAAAT TGTCGATGTGCCGGTGTCGGTGGCGTTGCTGGCGGACACACCGGCCAGCAGTTCCCAAACTATCCGTTTTAAAGTGACGGATGTGGATGAGCCGTGGATT TATACCGCTGCCGACAGCCGCTTCGTTGCGCCCTTGAATCGCTGATATTTCATCAACAATAAAGATCAAATGTGGGAGCTGGCTTGCCTGCGAAAACGGT AGTGCAGTAACAGATGCACTGACTGACACACCGCCTTTGCAGGCAAGCCAGCTCCCACAGTTCGCCTTGCGTACACATTCAAAAAGCAAATTAGGCCGCC
DNA Sequence for Gene
>PflSS101_2433
ATGAAACGCTACGAAAAATTCGCCGACGACATCGCAGAACTGATCCGCTCCGGCGTCCTCGGCCCCGGCCAGCGCGTGCCATCGGTGCGCTATGCCAGCC AGGCCTACGGCGTCAGCCCGTCCACCGTGTTCCAGGCCTATTACTTGCTGGAGCGTCGTGGCCTGATTCGCGCCCGCCCGCGTTCTGGCTACTTCGTCAA CACCCATGCGCCCAGCCCGTTTTCCGAACCGGTGGTGAGTGAGCAGGTGCATGAGTCCACCGATGTGGGCGTGAGCGAGCTGGTGTTCTCGGTACTGGAC TCGATCAAAGACCCCAACACCGTGCCCTTCGGCTCGGCCTTCCCCAGCCCCATGCTGTTCCCGCTGCCGCGCCTGGCTCGCTCCCTGGCCAGTGCCAGCC GCGAAATGGACCCACGCCTGGTGGTCACCGACATGTCGCCAGGCAACCCGCAACTGCGCCGGCAGATTGCCCTGCGCTATATGGTCGGCGGCCTGATGCT GCCAATGGAGGAGCTGCTGATCACCAACGGCGCCCTCGAAGCGCTCAACCTGTGCCTGCAGGCCGTGACCGAACCGGGCGACCTAGTCGCCATCGAAGCG CCGGCGTTCTACGCCTGCTTGCAAGTGCTTGAACGCTTGAAGCTCAAGGCCGTGGAGATTCCGGTGCATCCGCGTGACGGTATCGACCTGAACGCCTTGG CCCAAAGCCTTGAGCGCTATCCGATCAAGGCTTGCTGGACCATGACCAGCTTCCAGAACCCCATGGGCGCCACGCTGCCTGAGGAGAAAAAACCGGCGCT GGTGGAGCTGTTGCGCAGCCATCAAGTGCCGTTAATCGAAGATGATGTATATGCCGAGCTGTATTACGGGCAACAAGCCCCAAAGCCGGCCAAGGCCTTC GATACCGAAGGGCTGGTGATGCACTGCGGCTCTTTTGCCAAGAGCCTGGCACCGGGTTACCGCGTGGGCTGGGTCGCCGCCGGGCGCTTCGCGCAGAAGG TCGAGCGGTTGAAACTGATGACCTCACTGTGCCCATCGATGCCGGCCCAGGCGGCGATTGCCGATTACCTGCAACACGGCGGCTATGACCGGCACCTGCG CAAACTGCGCTACGCCCTGGAAGAACAGCAAAGCGCCATGCTGGCGGCCATCGCCCGCTACTTTCCGGCGCAAACCCGGGTCAGCCAGCCGGCAGGAGGC TATTTTCTGTGGTTGGAATTGCCGGAGCAGACCGACTCGCTGAAACTGTTCCAGATGGCCCTGGCCCAGGGCATCAGCATTGCGCCGGGGCCGATCTTTT CCGCGACCCAGCGCTTCAGAAACTGCATACGCTTGAACTATGGCAGCCCGTGGAACGAAGCCTCGGAGAAGGCCATGGAGACATTGGGGCGGATTGTGCG CTCGTTCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATGGAACCTACCGTCGCGTCTTAACGACTCAGAGGCCTCCACAGACCGAATAACGAGACCTGCGTGATCACCTGGAAAAACTGCTCGCTGCCAACACGTG TGCCTCGCAACCTGAGGCCTTTTCCCGTCCCTCGCCACTATATGCGCTGGGCGGAACAACAGCAGGTGCGCCAGATGACAGGCCCGAACGGACGCCCTGC CGGTGATCATCGCTCGGCAGAGGCGATCATCGAGCACAGTAGCGTGACAAAAAACTTCCTCAAAGGCTGCGATTTCTATCAGGTCGTCGATGACCTCAAG CGACAGGTCGGCGACTGGACTAACGCTAATCCAGACCCCAAAGCTCGAGCCAATGCGGCCTACGATCTGGATAAAGTGCTGCGCTTTCTCGATAACGTCG ATGATCGAACCCTCAATGGCAGCGATAGCCGCAATGGCCATATCGAGGGTTTTTCCAACTGTGGCTATCGCGTGGTGAAGCACTCCGAAGCCGATCTGCT
Amino Acid Sequence
>GntR family transcriptional regulator
MKRYEKFADDIAELIRSGVLGPGQRVPSVRYASQAYGVSPSTVFQAYYLLERRGLIRARPRSGYFVNTHAPSPFSEPVVSEQVHESTDVGVSELVFSVLD SIKDPNTVPFGSAFPSPMLFPLPRLARSLASASREMDPRLVVTDMSPGNPQLRRQIALRYMVGGLMLPMEELLITNGALEALNLCLQAVTEPGDLVAIEA PAFYACLQVLERLKLKAVEIPVHPRDGIDLNALAQSLERYPIKACWTMTSFQNPMGATLPEEKKPALVELLRSHQVPLIEDDVYAELYYGQQAPKPAKAF DTEGLVMHCGSFAKSLAPGYRVGWVAAGRFAQKVERLKLMTSLCPSMPAQAAIADYLQHGGYDRHLRKLRYALEEQQSAMLAAIARYFPAQTRVSQPAGG YFLWLELPEQTDSLKLFQMALAQGISIAPGPIFSATQRFRNCIRLNYGSPWNEASEKAMETLGRIVRSF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site