Pseudomonas fluorescens SS101, PflSS101_1818 (fabB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens SS101 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAACGCGCAACTGCCCGCCCCGAACATGCTGATGGTGGATCGCATCACCCATATCA GCGAAGAGGGTGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGCTGGATATCACCCCTGACCTGTGGTTCTTCGCGTGCCACTTCGAAGGCGACCCTGT GATGCCAGGCTGCCTGGGTCTTGACGCCATGTGGCAGTTGGTCGGTTTCTACCTGGGTTGGCAAGGCCTGCCGGGCCGCGGTCGCGCCCTGGGTTCGGGC GAAGTGAAGTTCTTTGGCCAGGTACTGCCGAGCGCCAAGAAAGTCACCTATAACATTCAAATCAAGCGCGTCCTCAAGGGCAAGCTGAACCTGGCCATCG CCGACGGTTCGGTGACTGTCGACGGTCGCGAGATCTATACTGCCGAAGGCCTTCGGGTCGGCGTATTCACTTCCACTGACAACTTTTAAGGGTTATCCGC
|
|
| DNA Sequence for Gene |
>PflSS101_1818
|fabB
ATGCGCCGCGTCGTTATCACTGGTCTGGGCATCGTTTCTTGCCTGGGCAATGACAAAGAGACCGTCACCGCTAACCTGCGTGCAAGTCGCCCTGGCATCC GCTTCAACCCGGAATATGCCGAAATGGGTCTGCGTAGCCAGGTTTCCGGCTCCATTGACCTGCCCCTCGAAGAACTGATCGATCGCAAGATCTATCGCTT CGTCGGCCATGCTGCCGCCTACGCCTACCTGGCCATGAAAGACGCGATCGCCGACTCCGGCCTGAGCGAAGACCAGGTTTCGAACGTACGCACCGGCCTG ATCGCCGGCTCCGGCGGCGCATCGACCCTCAACCAGATGGAAGCGCTGGACATCCTGCGCGAAAAAGGCGTGAAGCGCGTCGGCCCGTACCGTGTCACGC GGACCATGGGCAGCACCGTTTCCGCCTGCCTGGCCACGCCCTTCCAGATCAAGGGCGTGAACTACTCGATCTCCTCCGCGTGCGCCACCAGCGCCCACTG CATCGGGACTGCCGTTGAGCAGATCCAACTGGGCAAGCAGGACATCGTATTCGCCGGCGGCGGTGAAGAAGAGCATTGGAGCCAGTCGTTCCTGTTCGAC GCCATGGGTGCATTGTCCACCCAGTACAACGAAACCCCAGAAAAAGCTTCCCGCGCTTACGACGCCAAGCGTGACGGTTTCGTCATCGCCGGCGGTGGCG GCATGGTGGTGGTCGAGGAGCTGGAACACGCCCTGGCCCGTGGCGCCAAGATCTACGCGGAAATCGTTGGCTACGGCGCGACGTCCGACGGCTACGACAT GGTTGCGCCAAGCGGTGAAGGCGCCATCCGCTGCATGCAGATGGCAATGTCCACCGTCGACACCCCAATCGACTACCTCAACACCCACGGCACCTCGACC CCGGTCGGCGATGCCAAGGAAATGGAAGGCGTGCGCGCGGTATTCGGCGACAAGGCTCCGAAGATCAGCTCCACCAAGAGCCTGTCGGGTCACTCCCTGG GCGCCGCTGGCGTTCACGAAGCGATCTACTGCCTGCTGATGATGGAAGGCAACTTCATGGCCGGCTCGGCCAACATCGACGAAATTGATCCGGTTGTGGC CGATATGCCGATCCTGACCAAGACCGTTGAAAACGCCAAGATCGACACCGTGATGAGCAACAGCTTTGGCTTCGGTGGCACCAATGCCACCCTGGTACTG AAGCGCTGGCAGGGCAAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCCCCGCAGGTTGATCACATGAAAAAGCCCCGACTGGTTCGGGGCTTTTTTTGTGCTTTGATTTGAAACCGCGTCGCCTTCATCGCAGGCAAGCCAGCTC CCACCTTTGAATTGTGAATACAGTCAAATGTGGGAGCTGGCTTGCCTGCGAATGGGCCAACCCGGTTCCCCGCCCTACACCGAAAACCGCGCCACCATCG AATTCAAATCCACCGCCAACCGCGACAACTCCTGGCTCGCTGCACTGGTCTGGTTGGCCCCGGTCGATGTCTGGTGCGCCAGGTCGCGGATATTCATCAG GTTACGATCCACCTCCCGCGCCACCGCCGCCTGCTCCTCCGAGGCACTGGCAATCACCAGGTTGCGTTCGTTGATCAAGGTGAATGCCGAGGCAATCTCT TCCAGGGCCATGCCCGCCGATTTGGCGATGTCCAACGTGGACCGCGCCCGCGTGTTGCTCTGTTGCATCGAACTGACGGCCAGGTCGGTGCCCTGCTGAA
|
|
| Amino Acid Sequence |
>3-oxoacyl-ACP synthase
MRRVVITGLGIVSCLGNDKETVTANLRASRPGIRFNPEYAEMGLRSQVSGSIDLPLEELIDRKIYRFVGHAAAYAYLAMKDAIADSGLSEDQVSNVRTGL IAGSGGASTLNQMEALDILREKGVKRVGPYRVTRTMGSTVSACLATPFQIKGVNYSISSACATSAHCIGTAVEQIQLGKQDIVFAGGGEEEHWSQSFLFD AMGALSTQYNETPEKASRAYDAKRDGFVIAGGGGMVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAIRCMQMAMSTVDTPIDYLNTHGTST PVGDAKEMEGVRAVFGDKAPKISSTKSLSGHSLGAAGVHEAIYCLLMMEGNFMAGSANIDEIDPVVADMPILTKTVENAKIDTVMSNSFGFGGTNATLVL KRWQGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|