Pseudomonas fluorescens SS101, PflSS101_1709 (oprI)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens SS101 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CACAACCAGCACATAGGGAATAGTAGGCACCAAACCTGAAATTGCTCAAGGCGCACTCGTCATTCCCCGCCGCTGATGGATATAGAAAGGGCCTCGATCA ATCGGCGACCGATAGCCTGAACATTGCCGGCAGTTGAACCTTGAGACGAACTGGCGCTCTTAAAGTCACCTCTAGATGCGCAAAAGATGCCTGGCGCAGT AAAGCCAAGCGCGACCAAAGTGCCCCGCTTCGTTATATAAAATTTCATCGATTTACAAGGCTTAACACATGCGGGCCGGCCCTTTCAGCCTGGATCCAAT GTTCGTCGAGGCGCAAAAAACTGGACGGTTTTCATACAAACCGTCAAAAGATTAGCCAAAATAGATTCGGCACAAGAAATTTTTTTGCTTCTTGCGCAAC GTCAGTTTACTTACTACAAGTAATGGGTAGTATGTACGCCGGCTATTAGCTCACTCTGAGAAAGTAGCCATTAAATTGAAAGTCCTTGAAGGGGAACACG
DNA Sequence for Gene
>PflSS101_1709 |oprI
ATGAACAACGTTCTGAAATTCTCTGCTCTGGCTCTGGCCGCAGTTCTGGCTACCGGTTGCAGCAGCGTCTCCAAAGAAACCGAAGCTCGTCTGACTGCAA CTGAAGACGCAGCAGCTCGCTCCCAGGCCCGTGCAGACGAAGCCTACCGTAAAGCTGATGAAGCTCTGGCTGCTGCTCAAAAAGCACAACAGACTGCTGA CGAAGCTAACGAGCGCGCTCTGCGCATGCTTGAAAAAGCAAGCCGCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAATCCTTCGGGGTTGTTATCAAGCCGATCCATTTATGGGTCGGCTTTTTTTTGCCTTTGATTTGGCACGCGCCACCTGTAGGAGCGAGCTTGCTCGCGA AGATGGTCAACGATGACGCGGGCGTCCTGAATGACAGCGGCGCCCTCAGGTTTTTCGCGAGCAAGCTCGCTCCTACAGCAGGTCGGCCGGCGTACTTGAG GCCACAGGCGCCGCGCCTGGCACACCAATTTCGGTCGGCAAGCCATCCTCGGCGGCGACCACGTCACGTACCTGGTCCCAGTTGACCCGCAGGTTATTGG ACAGGTCTTCGCGCTTGAGCAACGCATTGATAACTGCGGTGTGCTTGTCGACCACCGAGGGCGTACCGTCATCGTTCAACGGCGTGTGGGCTTCAAGGTA GACCTTGCCGCCGCTGCTGCCGAACTTGTACGCGTCGTTGATGATGCGCACTGACGTGCCCACCGGCACCATGCCCGCCATTTCCAGCACGTTGTTATTG
Amino Acid Sequence
>outer membrane lipoprotein OprI
MNNVLKFSALALAAVLATGCSSVSKETEARLTATEDAAARSQARADEAYRKADEALAAAQKAQQTADEANERALRMLEKASRK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site