Pseudomonas fluorescens SS101, PflSS101_1677

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens SS101 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCCTCTCTTCGCAGCTTACGCTGGAAGGCCCTCCCCCGTCAGCAATTTGCCCGTTGTGTCTGGGGTGCAGCCCAAAAAAATTGCAACCTGAGTCTTTGAA GACGGGCCTACCAGTTTCAAAATCGAGTTTATGCTCAATCAACAGGAGCAACCTCTTGCGATCTTGGTCGATGATCAGCAGGTATTTTCAAAAAAGTGAT TAAAAGTACGGATTTTGAAACCGTCGAGGTTGTACTTCCTCTCAGCGGGTTCCCACGTGATTACCATCAACTCTGATGATGTATCCATCAGCGAGTTAGG CACGAGCATCTTGTATCGCTCAATAGTGTTCACACCGGCCAAGTGAGGAATCAGCAGGGCTGGAGGCGATTCGCCTCTAGGGCGTGTACTCACACCCTGT AACTCATTCATTTTTGACTCGCCCCAAACATCACCTAAGTTAGAAAAGCAGCTTCGGAAAAGCTGCTTTTTTCTCTTACCGATGTCATGGAGCGTCACCA
DNA Sequence for Gene
>PflSS101_1677
ATGCAAAACCTCTACCTCTCATCCTTCATCTTCGCCTTCCTCACCAGCCTCTCCGTCGCCACCACCGCTGCGCCGTCCATCAAGCCAGAGCCCCCAACCC CCATCTCCACCCAGATGACCAAGACCGAACAATCTTCCAAGGTCAACCTCAACGCCGCCGACGCCGAAACCCTGCGCCGTGATCTGTTCGGCATTGGTGC TTCCAAGGCGAAGGCAATCATCGCCTATCGCGAGAGCAACGGCCCGTTCACAGCGGTGGATGAGTTACTGGAAGTGAAAGGCATCGGCAAGGCATTGCTG GAAAAGAATCGCGACAGGCTGGTTATTAATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGATCTGAAAACAGCGCGGAGGGCCGGTCATACACCGGCCCTTCCTTTAACTAACGGACCTTGCGATTTCCTCCCTGACGCAGCATTGGCACGAAACGTG GTTACCTCTTCCTCAGTGATTGTTCAACAATCTCGAGGTAACGATGCCACTCACCCTATCCTTAGCCGACCAGATCGCTCTGGAACTGCGCGCCGACATC ATAGGCGGCCGGCTGTTACCAGGCATGCCGCTGATCGAGTCGGACCTGGTCAAGGTCTACAACGCATCCCGGAATACGATTCGCGAGGCGCTGCATCGTC TGGGCCAGGAGGGCCTTACTCGTTATATCCGCAATAAGGGCGTCATGGTTCGGCGATTGGAGCGAGCAGAAGTGCGCGACCTCTTCGTCGTCCGCCGCAC CCTGGAGTTGCAGGCGATTGCGCAAAGCGGGCCGCTGACGGACGCTCAATCAACACTTATGCAAAACGCCATTGACGCCACCACCCTGGCCCGGGAGCGG
Amino Acid Sequence
>competence protein ComEA
MQNLYLSSFIFAFLTSLSVATTAAPSIKPEPPTPISTQMTKTEQSSKVNLNAADAETLRRDLFGIGASKAKAIIAYRESNGPFTAVDELLEVKGIGKALL EKNRDRLVIN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site