Pseudomonas fluorescens SS101, PflSS101_1321 (quiP)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens SS101 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGGCACACAATGGCGAGATAATCCCCGGCGATTTTATTCCGGAGCAACATCGATGACACAGCAACCCCATGTCCATGGTCCTGACTGCAACCACGATCA TGACCACCATGATCACGACCACGGCCATGTCCACGGCCCGAACTGCGGCCACGCTCACCAAGAGCCGGTGCGCAATGCGTTGAAGGACGTCGGTCGCAAC GACCCCTGCCCGTGCGGCAGCGAGAAGAAATTCAAGAAGTGCCACGGCGCTTAAACCGCACGTGTAGGAGCGAGCTTGCTCGCGAAAAACGTCAACGATT ACGCGTGTTTCCTGAATAAACACAGCGCCCATGGGTTTCTCGCGAGCAAGCTCGCTCCTACAAAGCCTTAAACCAGCCCCCACCTCAATGGGCGGCTGTT TCAAGTTCTCACGCAATTGCCAAAACTCCCGCTTGCGTCGTTTCGCCGCGCTCACTAACGTAGCGCCTTTACTGACGCTACCCCCCGCAGGAGCTTTGCC
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| DNA Sequence for Gene |
>PflSS101_1321
|quiP
ATGGCCTCGCCAGCCCTCTTACATTTTCTTCCCCGGTTCGGCGTTGCCGCGGCAGTGGTCAGTGCCTTGGGCCTGGCCGGTTGCCAGCTCCAGAACACCC AGGACACCCTGCCGCCCGTTGCTGGCGTGCAGCCGATCAAGGGCCTGGCACAGAATGTGTCGGTGCGCCGCAATGCCCAAGGCATGCCGCTGATCGAAAG CAACACTTTCCACGACGCTCTGTTCAGCCTCGGTTACGTGCACGCCAGCGACCGCATCACCCAGATGGTCACTCTGCGCCTGCTGGCTCAGGGCCGTCTG GCGGAAATGTCGGGCCCGCAAGTGCTGGATGTCGACCGCTTCATGCGGGCGGTCAACCTCAAGAAAAGCGCTGGCGAGTTGTACAATGCCTCATCGCCAC GCCTCAGACGCTTCTTTGAAGTGTATGCCCGAGGCGTCAACGCCTACCTGTTCCGCTACCGCGACAAGCTGCCGGCGGACCTTGCCCAGAGCGGCTACAA GCCCGAGTACTGGAAGCCGGAAGATTCGGCGCTGCTGTTCTGCCTGCTCAATTTCAGCCAGTCGAGCAACCTGCAGGGGGAGCTCTCGTCCCTGGTGCTG GCGCAAAAGGTCGGCGTCGACAAACTCGCCTGGCTCACCCCAAGCGCACCGGACGAACCTGTCCCGCTGGCCGAAGCCGACAAGCTCAAAGGCGTCAACC TGAGCCAGATCACCGGCCTCGCCGGGCTGGAAACCGTAGGCCAGCAATTGCGCAGCCTCAACGCCCTGAGCGTCACCACCTCAAGCAACTGGGCCATTGG CCCGCAACGCAGCCGCAGCGCCAAGAGCCTGTTGGCCAACGACATCGCCGCGCAGCCACAAGCACCGTCGCCGTGGAACTACGTGCAGATTCGTGCGCCC AAATACCAGGCCGCCGGTGCTTCGATTGCCGGCCTGCCGACCCTGCTCTCCGGTTTCAACGGCAAAGTGGCGTGGAGCATGAGCGCGGTCAAGGGCGACA CCCAGGACCTGTTCCTGGAGAAGGTCAAACGCCAGGGCAACGCGCTGTACTACGAGAACAACGGCAAATGGCTGCCGGCCGGCGTGCGCAACGAAACCTT CTTCATCAAGGGCCAGCGCTCGATTCGCGAAGTGGTGTACGAAACCCGCCACGGCGCCCTGCTCAACAGCAGCCAGGCGCTCACCAGCGGTCTTGGCCTG GCCTTGCAAACCGCCGACTTCAAGGACGACAAGAGCCTGGATGCATTCTTCGACCTGTCCCGCGCACAAAACGCTGGCAAAGCCTCGGATGCCACCCGCG AGATTCGCGCCATAGCCTTGAACATGATCTTCGCCGACGCCAGCAACATCGGCTGGCAAGTCACCGGCCGCTTCCCCAACCGCCGAGAAGGCGAAGGCCT GTTGCCATCGCCGGGCTGGGACACGCGCTTTGACTGGGACGGCTACGCCGACGCGATGCTGCACCCGTACGACCAAGACCCGGCCCAGGGCTGGATCGGC ACCGCCAACCAGCGCACCGCACCGCGTGGCTACGGCATGCAACTGTCCAACGCCTGGGATGCACCGGAACGCAGCGAACGCCTGGCGCAACTGGCTAACG CCGGCAAGCATGACAGCCGCAGCCTGATTGCCATGCAATACGACCAGACCACCCTCTTCGCCGCCAAGCTCAAGAATATGTTCCAGGCGCCGGGCATGGC CCAGCCCCTCAAGCAGGCCATCGATGCATTGCCGGCAGCGGAACGCGCCAAGGCCCGCGAAGCACTCGAGCGCCTGATGGCCTTCGATGGTCGACTGGCG ACCACCTCGGCTGACGCGGCGATCTATGAACTGTTCCTGCAAGAAAGCGCCCGGCAAATCTTCCTCGACAAACTCGGCCCGGAAAACAGCGCCAGCTGGA AAGCCTTCGTCAGCAACGCCAGCCTGTCCTACTCGGCCATCGCCGACCACCTGCTGGGCCGTGAAGACAGCCCATTCTGGGATGACACGCGTACCGCGCA AAAAGAAGACAAACCCGCGATCCTGGCCCGCACCCTGGCCGCCGCCATCACTACTGGCGACAGCCAATTGGGCGCCGATCACAAGGCCTGGCAGTGGGGC AAGCTGCACAGCACCACCTGGAAAAACACCAGCGGCCAGGTCATCCGCGGCCCCTTCGCCAGCGGTGGCGATCACAACACCCTGAACCCGGCACCGTACA CCTGGGGCCAGGATTTCAACGCGACCCAAGTATCGGCGCTGCGCATGATCATCGACTTCGGCCAGGCGGAACCAATGATGGGCCAGAGCGGCATCGGCCA ATCCGGCAACCCGGCCAGCCCGAACTATGCCAGCGGCATCGACCCGTCGCTGAAGGCGCAATACCTGAGCTTTCCGATGCAGCCGCAGAATTTTGAGAAG GTGTACGGCAAGACAAGGTTGACCCTGACGCCTGGTAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGGGCTTCCTTGACGAAATCGGATAACGCTGTGTGGCTTGCTGCGATAGCAGCCGACGGTAACCACGATGCGAAGCGAGCCGCTCTCGATCTTGATCTT GATCTGCTTGTGATCTTGATCTGGCTTTTGATCTTAGGCGCCCCGTTAAACCACGCTGGCCGAACGCAGGCTTGAATTCGTGGGTAACCCGGCAGGACGC CGGGTTAGCCGCCCCGCGCCATGGATGGCGCGTGGCGGCGGCCCACGGATTCAAGCCTGCGTTCGGGCACACCGAGCCCAAGCGAGGGGCCGAGTGGTGG GGCAAGAGCGTTTTGCTTACTTTGCCGCTTTTGCAAAGTGAGCCGCCGTCAGGGCGGAACCCTAAGTGGCCGTTACCGCAGAAATGGATACGTACTCGGT ATAACAGTGTCGGCTGTCAGGACGTCATCGCAGGCAAGCCAGCTCCCACATTTAGATCGTGGGGTGTCAGGTAGATAGGCGTCGGCTGTCAGGCCGCCAT
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| Amino Acid Sequence |
>acyl-homoserine lactone acylase subunit beta
MASPALLHFLPRFGVAAAVVSALGLAGCQLQNTQDTLPPVAGVQPIKGLAQNVSVRRNAQGMPLIESNTFHDALFSLGYVHASDRITQMVTLRLLAQGRL AEMSGPQVLDVDRFMRAVNLKKSAGELYNASSPRLRRFFEVYARGVNAYLFRYRDKLPADLAQSGYKPEYWKPEDSALLFCLLNFSQSSNLQGELSSLVL AQKVGVDKLAWLTPSAPDEPVPLAEADKLKGVNLSQITGLAGLETVGQQLRSLNALSVTTSSNWAIGPQRSRSAKSLLANDIAAQPQAPSPWNYVQIRAP KYQAAGASIAGLPTLLSGFNGKVAWSMSAVKGDTQDLFLEKVKRQGNALYYENNGKWLPAGVRNETFFIKGQRSIREVVYETRHGALLNSSQALTSGLGL ALQTADFKDDKSLDAFFDLSRAQNAGKASDATREIRAIALNMIFADASNIGWQVTGRFPNRREGEGLLPSPGWDTRFDWDGYADAMLHPYDQDPAQGWIG TANQRTAPRGYGMQLSNAWDAPERSERLAQLANAGKHDSRSLIAMQYDQTTLFAAKLKNMFQAPGMAQPLKQAIDALPAAERAKAREALERLMAFDGRLA TTSADAAIYELFLQESARQIFLDKLGPENSASWKAFVSNASLSYSAIADHLLGREDSPFWDDTRTAQKEDKPAILARTLAAAITTGDSQLGADHKAWQWG KLHSTTWKNTSGQVIRGPFASGGDHNTLNPAPYTWGQDFNATQVSALRMIIDFGQAEPMMGQSGIGQSGNPASPNYASGIDPSLKAQYLSFPMQPQNFEK VYGKTRLTLTPGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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