Pseudomonas fluorescens SS101, PflSS101_0652 (tadZ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens SS101 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGGCAGCGATACCATCACCATCGAGTACAAGGAATTCGGCATTCGCCTGACGCTGACGCCGACGGTCATCGACCACAACCGCATCGCCTTGAAAGTCG CCCCGGAAGTCAGCGAGCTGGATTACAACAACGCGATCCGGATCCAGGGCATCCAGGTACCCGCCCTGACCGTCCGGCGCACCGACACCAGCGTGTCGTT AGCCGACGGTGAAAGCTTCGTGATCAGCGGCCTGATCAGCAGCACCAACCGCTCCACGATCGCCAAGCTGCCAGGCCTGGGCGACATCCCGATCATTGGT GCTTTCTTCCGCGACTCCACTATAAACAGCGAAGAAAAAGAACTGCTGATGATCGTCACGCCGCATCTGGTACAGCCACTGGCCGCCAATGCGCAGTTGC CGTCGCTGCCCGGCGAGAAACTGCGCACCTACGACCCGAACTGGTTCCGCCTGTTCTTCCTGGAAAACGGCAACTTCGACCGTCGCAGTGGACTTTCCCA
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| DNA Sequence for Gene |
>PflSS101_0652
|tadZ
ATGAGCGATAGCCTGAGCCAGACCTTCCTGGCAATCACCCGCAACAGCACCGACCTGGAATGGCTCCAGGGCGCGCTGGCGCCCCTTGGCCAAGTGATCA GCGTGGGCGGCGGCAGCCTCGATGAATTGCTGGCACTGGTGGACGTGACCTTCGCCAACCTGGTGTTCGTAGGCCTGGACCGTGAACACCTGGTGGCCCA GAGTGCCTTGATCGAAGGCGCTCTGGAAGCCAAGCCGATGTTGGCGGTGGTGGCCTTGGGCGACGGCATGGATAACCAGTTGGTACTCAACGCCATGCGT GCCGGCGCCCGGGATTTTGTCGCCTATGGCTCGCGCTCCAGCGAAGTGGCCGGGCTGGTGCGACGCCTGAGCAAGCGCTTGCCGCCCACGGCGCCGAACG CCCATCTCGGCGGCCTCACCGTGCTCTACGGCGCCCAGGGCAATACCGATGGCGCCCTGCTGGCGAGCCACCTGGCAATGGTGGTGCAAAAGAGTGGCCA GCAGACGCTGATGCTCGACCTCGGCCTGCCCAAGGGTGACAGCCTGGCGCTGCTGGGCCTGGACAGCACCTTCAATTTCGGCGACGCCTTGCGCCACCTG CGCCGCCTGGACGCCACCCTGATCAACAGCGCGTTCACCAGCACCGACGATGGCCTGCGCATACTCGCCTACGCCGCCAGCGATGAGCCCCTGGAAATGA CCAGCGCCGCCGAGCTGTACATGTTGCTCAGCGCCTTGCGCCAGCACTTCCAGCACATCGTGGTCAACCTCACCGGGCAAGCCGACAGCGAAGCCCTGCG CACCTTTGTCAGCCACTGCGACAAGTTGCTGTGGTGCACCGACCAGGGCGTGCTCGACTGTCGGCGTAACCTGGCGGTGCTGAACCTGTGGCGCGAAAAA GGCATGAAGCTCGACCATGCCAAGCTGCTCGTCGATCGCTACATCAAAGGCTGTGCCCCCGACACCGAAGCCCTGGAAAAAAGCTTCGGCCTGGAGTGCA TCGCCGTGCTGCCCCTGAGCCCAGAAGTGCGCCTGAACGCCAAGAACCAGGGGCAAAGCCTGTTCACCCTGGCTCCACGCGAAGCCTTGACCCAAGCCCT GCGCCACCTGGGCGAGCGCCTGGCCAAACGCACCGAAGGCTTGGATAAACCTTCGACACGCTGGTTCGAACGCCTGCTGGGGACGAGTCGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACAGCGAAAAACTCTTCGGCGCCCCGGCCCGTGGGGCTGCCGCGCACAACGACCACGACGGCCTGAAACTGGTGCTGCATCGCTACATCATCGATGCCAT CGAAGAATCCGGCCAGAACCTGCTGGAAGGCTCGCGCCAATCCCTGGCGCAATTTGTCATCGACAAAGTGGCCGAGTACATCACGCGCATGCACCTGGCG ATCTCGCGTTATGAGATGGAGCGTCTGGCTGAGGAAATCGTCGATGAGCTGACCGGCTTCGGCCCGCTGGAAGTGCTGCTGCGCGATGTGTCGATCACCG AGATCCTGGTCAACGGCCCGCACCGGGTGTTTATCGAGCGTGACGGGGTGCTCCACCAGAGCGACCTGCGTTTTATCGATGCGCACCATGTAGAACGTGT GATGCAGCGCATTCTCGCGCCCCTCGGAAGGCGCCTGGATGAGTCGTCGCCGATGGTCGATGCGCGCTTGCCCGATGGCAGCCGGGTCAATGCGATCATC
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| Amino Acid Sequence |
>Flp pilus assembly protein TadZ
MSDSLSQTFLAITRNSTDLEWLQGALAPLGQVISVGGGSLDELLALVDVTFANLVFVGLDREHLVAQSALIEGALEAKPMLAVVALGDGMDNQLVLNAMR AGARDFVAYGSRSSEVAGLVRRLSKRLPPTAPNAHLGGLTVLYGAQGNTDGALLASHLAMVVQKSGQQTLMLDLGLPKGDSLALLGLDSTFNFGDALRHL RRLDATLINSAFTSTDDGLRILAYAASDEPLEMTSAAELYMLLSALRQHFQHIVVNLTGQADSEALRTFVSHCDKLLWCTDQGVLDCRRNLAVLNLWREK GMKLDHAKLLVDRYIKGCAPDTEALEKSFGLECIAVLPLSPEVRLNAKNQGQSLFTLAPREALTQALRHLGERLAKRTEGLDKPSTRWFERLLGTSR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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