Pseudomonas fluorescens SS101, PflSS101_0441

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens SS101 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCTCGGCATCAAGCCGCTGGCGATGGTGGCCAGCGCCGCACAGAACAACGCGGCAACCATCACCTGCTTGCGCCCCAGCCTGTCGGATATCGGCCCGGT GATCAGCAGGCCGCAGGCGAGCATCGCGGTGGCGACGGACAGAATCAGGCTGCTTTGCGCCGCATTGATGGAAAATTCATGGGACAGCGCCGGCATCATC GGCTGCACGCAATACAACAAGGCAAACGTGGCGAAGCCGCCGGAGAACAGCGCCAGCACCGTGCGCATGAACATCGGCGTGCCTTTTTCGATGTACGCGT CATTAAGCTGCGCCACCACCTCATCGAGGGCTGAGGGCGGGGTGTGTTGGGCAAGTGGAGCAACAGCAGGATTCACGGGGGACCTCGGGGAGGAAAGTCT GCCAGGACTGACAATGCAAAAAAGAATATAGCTGGCTAATGATTCTTTCCAATATATTGTTCGACCTGTTTGATAGTTTTTACGACCTAATGAGGCTTGC
DNA Sequence for Gene
>PflSS101_0441
ATGGAATTCCGCCATTTGCGCTACTTCATCGCCGTTGCCGAAGAACTGCACTTCGGCCGCGCCGCGCAGGTGCTGGGCATCTCGCAGCCACCCCTGAGCC AGCAGATCCAGGCGCTGGAACACGAGCTGGGCGCACGCTTGTTCGAGCGCACCAATCGTCGGGTCGAGCTGAGCGAGGCAGGGCGCTTGTTCTTGCAAGA GGCACGCTTGGTACTGGCCCAGGTCGACAAGGCGGCAGATGTGGCGCGGCGTGCGCAGTTGGGCGAGCTGGGTGAGTTGAAGATCGGCTTCACCTCGTCT GCGCCGTTCAACGCGAGCATTCCCCGGGCGATCTTTGCCTTCCGCCAGGCATTCCCGGCGGTGCATCTGAACCTGCAAGAAATGAGCAGCACCCAAGTGG CCGAGTCGCTGGTGGACGAGTCGATTCAGGTTGGGTTGATGCGGCCTTTGCCCTTGCCCGACTCACTGAACGTGATCGAGTTGATGCGCGAGCCATTAGT CGCGGTACTGAGCGCCGGCCACCCATTGGCCCACGGCAGCGAGCGCGGCTTGCATCTGGAGCAATTGGCCGAGGAGCCTTTTGTGTTCTTCCCGCGCAGT TACGGCAGCGGCTTGTACGCGCAGTTGCTCAACCTGGCCCGCGACGCCGGGTTCAGCCCGCACTTTGCCCAGGAAGCAGGGGAAGCAATGACCATCATCG GCCTGGTGGCGGCGGGGTTGGGGGTGTCGGTGTTGCCGGCGTCTTACCAGCGCATCCGCATTGACGGCGTGGTCTATCGCACCTTGCTCGACCCGCAGGC GGTGACGGCGGTGTGGCTGGTGCAGCGTAAGGGCGCGCAAACGCCGATGGCGAAAGGGTTTGTGGAGTTGTTGACGCGTAAGGCCGCTCAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCTGTGGCGAGGGAGCAAGCTCCCTCGCCACAGGGGGTCAGTTTTGGGGCGAAGTATTTGCTTCATTCACGCTGTAAGTACGCAGCCCCGCCAGAATATC CCGATCCAGCATGCTCACCCAACGGTTGTAGTTGCGATGGATCTTGCCGTCCTTGTAGCCCAGGTCGCGGCTGTCGCGGTAGGTGATGGCGTAGCTGTTG CGGGTGTAGCGGATGTCGATGGCGGCGTAGAACTGGCCGCGCACGGTGATCTCGGCCTGCACCAGTTGTGGGCTCAGGCGTTGTACCGTCCACTCGCGTT TTTGCAGAGCGGCGACGATCACTTGCTTCATTTTTTCTTCGCTGACCTGGCTTGTGGCCGGTAACTCGTGCTGGGTGTTGAGCACCGGTTTGCTGGTGCA GCCAGCCGTGGTCAGCAGGGCCAGGGTGATCAGGGTAGCGCGTAGCAGGGAAGACATTCCGTTTTCTCCAGTCGATTAAAAAGTCAGGCCCAGCGGCGGA
Amino Acid Sequence
>LysR family transcripitonal regulator
MEFRHLRYFIAVAEELHFGRAAQVLGISQPPLSQQIQALEHELGARLFERTNRRVELSEAGRLFLQEARLVLAQVDKAADVARRAQLGELGELKIGFTSS APFNASIPRAIFAFRQAFPAVHLNLQEMSSTQVAESLVDESIQVGLMRPLPLPDSLNVIELMREPLVAVLSAGHPLAHGSERGLHLEQLAEEPFVFFPRS YGSGLYAQLLNLARDAGFSPHFAQEAGEAMTIIGLVAAGLGVSVLPASYQRIRIDGVVYRTLLDPQAVTAVWLVQRKGAQTPMAKGFVELLTRKAAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site