Pseudomonas fluorescens SS101, PflSS101_0160

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 770 836 4.2
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 1293 1321 9.0
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 330 366 0.015
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 466 506 0.011
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 486 519 0.0013
Pfam PF14040 Deoxyribonuclease NucA/NucB IPR029476 Deoxyribonuclease NucA/NucB 2547 2645 9.8E-10
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 863 918 0.0079
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 1752 1789 1.9
SUPERFAMILY SSF51126 Pectin lyase-like IPR011050 Pectin lyase fold/virulence factor 55 334 5.65E-62
Coils Coil Coil - - 2406 2433 -
Pfam PF05860 TPS secretion domain IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 58 308 3.8E-59
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 1202 1240 31.0
Pfam PF13332 Hemagglutinin repeat IPR025157 Hemagglutinin repeat 1877 2019 7.8E-10
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 313 367 15.0
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 864 897 0.0026
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 816 854 6.4E-5
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 466 501 0.0064
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 1131 1194 0.32
MobiDBLite mobidb-lite consensus disorder prediction - - 2516 2537 -
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 781 814 0.031
Gene3D G3DSA:2.160.20.10 - IPR012334 Pectin lyase fold 51 342 3.3E-102
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 901 938 0.003
Pfam PF04830 Possible hemagglutinin (DUF637) IPR006915 Domain of unknown function DUF637, haemagglutinin putative 2143 2336 4.1E-29
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 444 480 10.0
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 397 436 0.0037
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 611 647 0.0034
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 1282 1319 0.0033
Pfam PF13332 Hemagglutinin repeat IPR025157 Hemagglutinin repeat 1736 1803 7.5E-5
SMART SM00912 Haemagg_act_2a IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 64 185 4.9E-45
NCBIfam TIGR01901 JCVI: filamentous hemagglutinin family N-terminal domain IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 82 180 4.1E-18
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 1077 1123 2.0
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 382 447 0.0025
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 314 348 1.3
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 1127 1163 0.0021
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 692 729 0.055
MobiDBLite mobidb-lite consensus disorder prediction - - 2577 2596 -
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 970 991 0.4
Pfam PF13332 Hemagglutinin repeat IPR025157 Hemagglutinin repeat 1805 1873 5.1E-8
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 591 613 3.1
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 507 538 0.23
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 590 665 6.1

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.