Pseudomonas fluorescens SS101, PflSS101_0068 (metI2)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens SS101 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGCCCTCGACCCGCAAACCACGGCGTCGGTCCTGCAACTGCTGGCCGAGATCAACCGCGAGCTGAACCTGACCATCGTGTTGATCACCCATGAAATGG ACGTGATCCGCCGCGTATGCGACCAGGTCGCGGTGATGGACGCCGGGGTGATCGTCGAGCAAGGCTCGGTGGCCGACGTGTTCCTGCACCCCAAGCACCC GACCACCAAACGCTTCGTACAAGAAGCCGAACAGGTGGACGAAGGCGAGCAGCGCGACGACTTTGCCCATGTGCCAGGCCGTATCGTGCGCCTGACGTTC CAAGGGGACGCGACCTACGCGCCACTGCTGGGTACCGTCGCACGGGAAACCGGGGTGGACTACAGCATCCTTGCCGGTCGTATCGACCGCATCAAAGACA TCCCTTACGGGCAACTGACCCTCGCCGTCACCGGCGGTGACATGGACGCTGCATTTGCACGCTTCACCGCCGCCGACGTTCACATGGAGGTCCTGCGCTG
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| DNA Sequence for Gene |
>PflSS101_0068
|metI2
ATGGACGTTTTCCTGAGTTTCTTCGCCAATATCGACTGGTCTGAAATCTGGCTCGCCACCGGCGATACCATGACCATGCTGTTCGGCTCGCTGTTCTTCA CCGTGCTGCTGGGCCTGCCCCTGGGCGTGCTGTTGTTCCTGACCAGCCCGCGCCAGCTGTTCGAACAAAAAGGCCTGTACGCGCTGCTGTCGCTGATCGT GAATATCTTGCGCTCGCTACCGTTCATCATCCTGCTGATCGTGATGATTCCATTCACGGTACTGATCACCGGCACGTCGCTGGGTGTCGCCGGCGCGATC CCACCGCTGGTCGTCGGCGCCACGCCATTCTTTGCGCGCCTGGTGGAAACAGCCCTGCGCGAAGTGGACCGTGGCATCATCGAAGCCACCCAGGCCATGG GTGCTACCACCCGCCAGATCATCACCAACGCCCTGTTGCCCGAAGCCCGCCCTGGCATCTTCGCAGCGATTACGGTGACGGCGATTACACTGGTTTCCTA CACCGCAATGGCGGGTGTGGTCGGTGCTGGCGGCCTGGGCGACCTGGCAATCCGTTTTGGCTACCAGCGCTTCCAGACCGATGTGATGGTGGTCACCGTG GTGATGCTGTTGATTCTTGTGCAAATTCTGCAAACCGTCGGCGACCGGCTGGTGGTGCATTTTTCTCGTAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGGCCATTGCCGGCACACAGCCGGCAGATGCCCGAACAAGGAGCTTGCTGGATGAAAAAACTACTGGTTGCTTTCGCCGCCGTGGCTGCGTTTTCCGCCC ACGCCGAGACCATTACGGTCGCTGCTTCGCCGGTGCCTCACGCCGAAATCCTCGAATTCGTGAAGCCTGCCCTGGCCAAAGAAGGCGTGGACCTGAAGGT CAAAGTCTTCACCGACTACGTGCAGCCGAACGTACAGGTGGCTGAAAAGCGCCTGGATGCCAACTTCTTCCAGCACCAGCCGTACCTGGATGAATTCAAC AAGGCCAAAGGCACTCACCTGGTGAGCGTCGGCGCGGTGCACCTGGAGCCTCTGGGCGCTTACTCCAGCAAGTACAAAAAATTGGCCGACCTGCCTGACG GCGCCAACGTGGTGATTCCGAACGACGCCACCAACGGTGGTCGTGCGCTGTTACTGCTGGCCAAGAACGGCCTGATCACCCTGAAGGACCCGACCAACAT
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| Amino Acid Sequence |
>metal ABC transporter permease
MDVFLSFFANIDWSEIWLATGDTMTMLFGSLFFTVLLGLPLGVLLFLTSPRQLFEQKGLYALLSLIVNILRSLPFIILLIVMIPFTVLITGTSLGVAGAI PPLVVGATPFFARLVETALREVDRGIIEATQAMGATTRQIITNALLPEARPGIFAAITVTAITLVSYTAMAGVVGAGGLGDLAIRFGYQRFQTDVMVVTV VMLLILVQILQTVGDRLVVHFSRK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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