Pseudomonas fluorescens SS101, PflSS101_0027

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens SS101 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGTCCCAGTTCACCGCCCAGCCATAGTCGGCGGGGTAGATGTCGCTGGTCAGGCGTTCCTCATAGCCGTGCAACTGGTCGGGGCCGCAGAAGTGCATCTT GCCCGACAGCGCAGTGCGGTAGCCGAGGCGACGCAGGTAGTGGGCATAGGTCGGTACATCGGCGGGGAAATCGGCGGCGTTGTCGTAGGCGCCGATCTTG CTCGGCAATTGGCCACTTACCAAGGTGAAGCGCGACGGTGCGCACAATGGGCTGTTGCAATAGGCGGCGTCGAACACCACACCTTGTGCCGCCAGGCGGC TGAGGTTGGGCAGCTTGATCGGGGAAGGCCCGTAGAACGGCAGCATCGGCGCGGCCATCTGATCGGCCATGATGAAAAGAATGTTCTTGCGCTTCATGGT TTCTCGGCATTCCATAGGCGGTGTTTATGCGAATGAGCATGCGGTCCATCAATACATGGGTAAAGCCCATGCGCGGCAATGACTAGGATAAGTTGAGCTT
DNA Sequence for Gene
>PflSS101_0027
ATGTATGAAGCGCTGGGTGACCTCTCTCTCGATTTGCTGCGCGCCTTTGAGGCAGCGGCACGCCATCGCAGTTTCACCGCTGCCGCGATGGAACTGGGCA CCACCCAACCGGCGGTCAGCCAGCAGATCAAACGCCTCGAAGAGCAACTGGCGATCCGCCTGTTTGACCGCATTTATCGCGGCATTGAACTGACCGACGC TGGCGCCCTGCTGTTCGAGCATGTGCAAGGCGGCCTGCAGAACATCAACCAGGGCCTCGGCGCCATTACTCAACAAAGCCAGCATGAAGTGCTGCAAGTC GCCACTGACTTCGCCTTCGCTGCCTATTGGCTGATGCCGCGCCTGCATCGCTTCCACCAGGCCAACCCGCAGGTGGATGTCAGCCTGGTCACCAGTGAGC GCAACCACGCCACTCTGCGCAGCGATATTGATGTGGCGGTGTTGTTCGGCGATGGCCGTTTCAAGCAGGGCGAGAGCCTGTGGTTGTTCAATGAGGAGGT GTTTCCGGTGTGCAGCCCGCAGTGGCTCAAGGAGCAAGCTGCGCCCCTGACGGTGCAGACCTTGCAAGGCTGCCCGTTGCTGCACCTGCGCCAGGAAAAC AACAGCCAGTGGTTCGACTGGAACGGCGTATTCCGCGAACTGGGTATCACCGCTGCGCCGACCCCTGGGCAATTGCGCTTCGACAACTACACCTTGCTGA TCCAGGCCGCGATTGCCGGCCAGGGTGTCGCCATCGGCTGGCGCCACCTGGTGGATAACCTGCTGGAGCAGAATTGGTTGTGCCGACCGATCAGCCCCAC GGTGACGTCGCGATTTGGCTATTACGTGGTGCAGCCCCAGCGCAAACGCCGTGGTCAGTTGGTGGACCGCTTTGTCGAGTGGCTGGTGGCGGAACAGGCC AGCAGTGCGCAGTCGTTGACCGGGCTGGCCCTGCCGTCGATTGCGGTCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GATCGGCGCACAGTGGAACCGGAGTCAGTCATGCAACGTATCAAGGGCTACCACGCCCATATCTACTTCGACGCCAGTACGATCGAGCAGGCGCGCACGC TCTGTGAAGACGCCGCCAGGCTGTTCCCGTTGCGCATGGGCCGCGTGCATGAGCGGCCGGTGGGCCCGCACCCGGATTGGAGTTGCCAACTGGCGTTCGA GCCGGAATATATCGGCGTGGTATTGCCGTGGCTGGCGCTGCACCGCAATGGTTTGGTGGTGTTCCTGCACCCGGAAACCGGTGATGACCTCAAGGACCAC ACCGATTACGCCATTTGGATGGGTGCGATGCGCGAGCTGGACCTGTCGATTTTTTAAGCGTTCTTATCCGGTTAACCCGCGTCTTTCCCTAAGTAAAAAC AGGAAGAGTTGTAGGATTTATCTTGCCTTGTCTCATTATATGGGATTGATATTTATATATTGAGATGTTCTGCGCCGTAGGTTTATATTCGCCCATCTGC
Amino Acid Sequence
>LysR family transcriptional regulator
MYEALGDLSLDLLRAFEAAARHRSFTAAAMELGTTQPAVSQQIKRLEEQLAIRLFDRIYRGIELTDAGALLFEHVQGGLQNINQGLGAITQQSQHEVLQV ATDFAFAAYWLMPRLHRFHQANPQVDVSLVTSERNHATLRSDIDVAVLFGDGRFKQGESLWLFNEEVFPVCSPQWLKEQAAPLTVQTLQGCPLLHLRQEN NSQWFDWNGVFRELGITAAPTPGQLRFDNYTLLIQAAIAGQGVAIGWRHLVDNLLEQNWLCRPISPTVTSRFGYYVVQPQRKRRGQLVDRFVEWLVAEQA SSAQSLTGLALPSIAV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site