Pseudomonas fluorescens Q2-87, PflQ2_5180
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens Q2-87 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCGGCCGCTGCACATGGTCCTGGTCAAGGGGCCGAGCCTCAAGCCGCTCTATGCCCATTGCCTGGGCGGCGGGCCGAAGCCGCGCGTCACCGTGACCA CTCACCCGGCCGCCGACGGCCAATGGGTCTGGTACCTGGGTGGCGATCTCGCCGAAGGTGACGCTGTGGCCCGCGAGCCTGCCGCACAGATTGCCGCCGC GCAGAAAGAGCTGGGCCAATTACTGCCTTGGATAGACCTGAGCACCGCGCAGTGGGCCACGCTGCGAGTCGATCGCGCCGAGCCCTTGCAATCGGGCCTG ACGCGCCCGGACAACGCCTTTCTCGCCGAGCAGGATCGCCTGTTGGTGGGTTGGCCGACCAAACTGGCCTTGGCCCCGGATTTCGCCGATCGGGTGTTCA GTGCGCTGCAACGCGACGGCATCCAGCCCAGCCATCCGACACCACTCCCCGAGTTGCCGAAGCCGCCCATGGGTGTGCCTGCCTGGGATCAATTACTGCC
|
|
| DNA Sequence for Gene |
>PflQ2_5180
ATGAGCCAACCGACCCTGCACGACCTTCATCGTCCGCTGAGCCCTAACGGCCCGTGGGTCTCCCCACTCGGCCTGGGTACCGTCAAGCTCGGCCGCGACC AGGGTGTCAAATACCCCAACGGCTTCCGCATTCCCGATGACGATGAAGCGCGCATGCTGCTCAAGCTGGCGCGCGACCTGGGCATCAACCTGATCGACAC CGCGCCGGCCTATGGCCGCAGCGAGGAGCGTCTTGGCCCGCTGCTGCGCGGCCAGCGCCAGGACTGGGTGATTGTCAGCAAGGTCGGGGAAGAGTTCAGC AACGGCGAGTCGCGTCACGATTTCAGCGCCGCTCATACCCGAGTCTCGGTGGAACGCAGCCTCAAGCGCCTGGAAACGGACTATATCGACCTGGTGCTGG TGCACTCTGACGGCAATGATCTGGCGATCCTCAACGACAGCGAAGTCTACCCGACATTGGCCGCGCTCAAGCGTGAGGGCAAGATCGGCGGCTTCGGCTT CTCCGGCAAGACCGTCGAAGGCGGTCTCAGAGCCTTGGAGCAAGGCGACTGCGCGATGGTCACCTACAATCTGAACGAACGAAGCGAGAAAGCTGTCATT GACTACGCTGTCGAACACGGCAAGGCGATCCTGGTGAAAAAAGCCTTGGCCAGCGGTCACGCCTGCCTGAGCCCCGGGGTAGACCCGGTTCGCGCCAGCT TCGAACTGTTGTTTGAGCATCCCGGGGTTGCCAGTGCTATTGTCGGCACCATTAATCCGCTGCACCTCGCCCATAACGTCGCGACCGTAGCCAAGGTCCT GCGTAATAACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CGCCGCTTTGCGCGGCATTAAGGAAGGAGCCGACATGCCGCGTACGCTCATCAGAAAAAATCCAAGCAACTTCAAGACCCTGCCCCTGTTCGTCGAAGCG ACGCCCGAAGGCCTGACTTATCAGAGCGTCGGGATGCCGCTTAACTTTGCGCAAACATTGCAGCGCCGCCGTCCCGTGGCCGTCGCCGATGCTGAGCGTT TCTCGCTGGAGCTCGCCAACCTGGGCGTCTCGGTGCGCCTGACCCTACATTGGCAAAATCGCGACTATTGGGTACTGGTGCGCCAACGCCGACAGGACCG TGGCGATGTGGTGCTCAAGTTGATTTCCGGCTACGTCCCGGCCCATGAACTGAACCTGCCGCTGCTCACCGCCATCAATGAAATCGCTGAAGAGTGCCTG CTGGAAACCCCGGAAGGCTGGCTCGGCGGACGCTTCAACGACACTTGGCTACCGGCACCCTACGCCACGGCGCTGCATTATCGCGAAGCCTTGCCCTTTC
|
|
| Amino Acid Sequence |
>aldo/keto reductase
MSQPTLHDLHRPLSPNGPWVSPLGLGTVKLGRDQGVKYPNGFRIPDDDEARMLLKLARDLGINLIDTAPAYGRSEERLGPLLRGQRQDWVIVSKVGEEFS NGESRHDFSAAHTRVSVERSLKRLETDYIDLVLVHSDGNDLAILNDSEVYPTLAALKREGKIGGFGFSGKTVEGGLRALEQGDCAMVTYNLNERSEKAVI DYAVEHGKAILVKKALASGHACLSPGVDPVRASFELLFEHPGVASAIVGTINPLHLAHNVATVAKVLRNN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|