Pseudomonas fluorescens Q2-87, PflQ2_4750 (morA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.450.20 PAS domain - - 584 723 3.1E-21
CDD cd01948 EAL IPR001633 EAL domain 1028 1266 1.5405E-116
SMART SM00091 pas_2 IPR000014 PAS domain 586 652 2.4
CDD cd00130 PAS IPR000014 PAS domain 595 711 0.00483275
CDD cd00130 PAS IPR000014 PAS domain 475 571 2.11268E-4
CDD cd01949 GGDEF IPR000160 GGDEF domain 848 1010 7.48139E-62
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 571 712 2.79E-16
FunFam G3DSA:3.20.20.450:FF:000001 Cyclic di-GMP phosphodiesterase yahA - - 1023 1277 5.4E-103
SMART SM00091 pas_2 IPR000014 PAS domain 722 788 5.3E-7
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 734 844 4.51E-23
Pfam PF13426 PAS domain IPR000014 PAS domain 734 835 3.6E-16
SMART SM00267 duf1_3 IPR000160 GGDEF domain 836 1012 1.2E-67
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 849 1018 5.8E-61
SMART SM00086 pac_2 IPR001610 PAC motif 531 574 3.0E-6
PANTHER PTHR44757 DIGUANYLATE CYCLASE DGCP - - 722 1273 0.0
Gene3D G3DSA:3.20.20.450 EAL domain IPR035919 EAL domain superfamily 1022 1278 1.9E-107
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 450 581 4.2E-10
Pfam PF13426 PAS domain IPR000014 PAS domain 598 713 5.9E-7
Pfam PF13426 PAS domain IPR000014 PAS domain 350 439 0.92
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 842 1014 6.5E-45
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 726 842 3.4E-18
SUPERFAMILY SSF141868 EAL domain-like IPR035919 EAL domain superfamily 1027 1274 9.29E-94
SMART SM00086 pac_2 IPR001610 PAC motif 400 441 36.0
SMART SM00052 duf2_2 IPR001633 EAL domain 1022 1268 9.0E-128
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 582 721 7.7E-12
CDD cd00130 PAS IPR000014 PAS domain 731 833 1.88186E-11
Gene3D G3DSA:3.30.450.20 PAS domain - - 282 445 8.4E-7
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 347 448 4.0E-6
Gene3D G3DSA:3.30.450.20 PAS domain - - 724 848 6.6E-29
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 844 1010 5.2E-40
SMART SM00086 pac_2 IPR001610 PAC motif 672 714 1.2E-4
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 438 572 4.89E-13
Pfam PF08447 PAS fold IPR013655 PAS fold-3 477 568 5.7E-8
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 852 1013 5.49E-49
Pfam PF00563 EAL domain IPR001633 EAL domain 1028 1263 9.7E-77
Coils Coil Coil - - 389 409 -
SMART SM00086 pac_2 IPR001610 PAC motif 794 836 3.0E-5
Gene3D G3DSA:3.30.450.20 PAS domain - - 446 572 1.8E-13
SMART SM00091 pas_2 IPR000014 PAS domain 453 522 2.1
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 847 1008 4.8E-50

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.