Strain | Pseudomonas fluorescens Q2-87 chromosome, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTTCGACGGTTTCCCACGCACCATTCCCCAGGCCGAAGCCTTGGTAGAAGCTGGCGTGGAGCTCGATCATGTGGTCGAGATCGCCGTCGACGACGAAGAG ATCGTCCAGCGTATCGCCGGTCGTCGTGTCCACGAGCCGTCCGGTCGTGTCTACCACACTATCTACAATCCGCCGAAAACCGCGGGCAAGGACGACGTCA CCGGTGAAGACCTGGTGCAGCGCAAGGACGACACCGAAGAAACCGTGCGCCATCGCCTGTCGGTCTACCATTCCCAGACCAAGCCGCTGGTGGACTTCTA CCAGAAGCTTTCCGCCAAGACCCAGGGCAAGCCGAAGTACAGCCACATCGCTGGCGTCGGTTCGGTTGAAGCGATCACCGGCAAGGTGCTTCAAGCGCTG AGCTGAAAAGTCTGATCAGTTGCGTCAACTACGGCCCGCTTGCGGGCCGTAGTTGTTTATACTGGCGCACTTTTTTCCCACCTGATTTACGGACACATCG
|
|
DNA Sequence for Gene |
>PflQ2_4411
|yeaZ
ATGAGCACCTTGCTGGCCCTGGACACTGCGACTGAAGCTTGCTCCGTTGCCTTGCTGCACGACGGCAAGGTCACGAGCCATTACGAGGTGATCCCGCGGC TGCATGCCCAGAAGCTCTTGCCGATGATCCAACAACTGCTCAGTGACGCCGGCACTACTTTGCAGGCGGTGGACGCGATTGCCTTCGGTCGTGGTCCGGG AGCATTCACTGGCGTGCGTATCGCCATTGGTGTGGTGCAGGGCCTGGCGTTCGCGCTGGAACGCCCAGTGTTGCCGGTGTCCAACCTCGCGGTACTGGCA CAGCGAGCGTTGCGCGAACACGGCGCCCGCCAAGTCGCGGCAGCCATCGATGCGCGTATGGACGAGGTGTACTGGGGTTGCTACCGCGAGACTGATGGCG AGATGCGCCTGGTCGGCGCCGAAGCGGTGCTGCCACCCGAAGCCGCGGCGTTACCGGGCGAAGCCGACGGCGACTGGTTCGGCGCCGGTACCGGTTGGGG CTACGGCGAGCGCATCGCCGTCCACCTCAGCGGGCAGGACGCCACTGCGCTGCCCCACGCCGAAGACCTACTGGCCCTGGCACGCTTCGCCTGGGAACGC GGCGAAGCCATCCCGGCCGATGATGCACAACCGGTGTACCTGCGGGACAAAGTCGCGACCCCGAAATCCGAACGGTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
ACCCAGGGTTGACCGCATTCCCAAGCGGGCAGCGTTGTGGCGAGGGAGCTTGCTCCCGCTCGAGTGCGCAGCGCTCGCTGGGTGACCGACTGAACTACGT CGGGAGGGGTGCTGCGCACCCCAGCGGGAGCAAGCTCCCTCGCCACAGAGTTACCTGCAACTTTCAGGTGCTTTAGAGTCACCCCATTCAAAAGTCATTT TCCCACCCCAAAGTCACGTCAAAAATCACCAGTCGTCACTTTTTCCCCCTGTTCTTAAACCTTTTCGACTTTCTGTGTTCTAGTTATCACTTGCGCATTT GCGCGGCTGCGAAAGTGCCGCTAAATTGCCATCATTGATACCGAGCATTCTGTTATGCGTATAGACGGCGTTTCATCCCAGTCCTACCCCATCAAGCGCA AGCCTCGTGCAGGCAAAGTCGCCGAGCCCGAGTCTTTCGATGATATCGATGGCGAACTGGAAACCCCGTCCGAGGAGCAACTGGCCGCCCGTGCCGCCAA
|
|
Amino Acid Sequence |
>peptidase, M22 family
MSTLLALDTATEACSVALLHDGKVTSHYEVIPRLHAQKLLPMIQQLLSDAGTTLQAVDAIAFGRGPGAFTGVRIAIGVVQGLAFALERPVLPVSNLAVLA QRALREHGARQVAAAIDARMDEVYWGCYRETDGEMRLVGAEAVLPPEAAALPGEADGDWFGAGTGWGYGERIAVHLSGQDATALPHAEDLLALARFAWER GEAIPADDAQPVYLRDKVATPKSER
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|