Strain | Pseudomonas fluorescens Q2-87 chromosome, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGTTTGCTGTTCTGGCTGGTAGCGACCCTGTCGCTGACGATTTACGAGCAAGGCACCCGGTTGCCGGACATCAACCTGCGCACCGCCGACGGCGAGACCG TGAAACTCACCGATTATCAGGGCGGCCCCCTGGTGATCAACCTCTGGGCCACCTGGTGCCCGCCCTGCCGCCGTGAAATGCCGGTGCTGGAAGAAGCCCA GCAGCAGCGTCCGGACCTGACCTTCTTGTTCGTCAACCAGGCCGAAAGCATGCAAAGCGTCAGCACCTACCTCGCCACCCAGGGTTTGAGCCTGACCAAC GTGTTGTTCGATGGCAGCGGTCGCCTCGGCCAGGCCGTCGGTTCAATGGCCTTGCCTACGACGCTGTTCTACAGCGCCGACGGCCGTCTGCTGGGCAGCC ACTTGGGTGAGTTGTCCGAAGCGAGCCTGGCCCGCGCCCTGGAAAACTTCGAAACGCCGGGCTCGACCACGGCGCCCCACCCCGCCATAAGGAAATCGCC
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DNA Sequence for Gene |
>PflQ2_3741
|dsbG
ATGCCCCGCCTCCGCCACCTGCTGACCCTGGCCGTTGCCGCCGCCCTGTCGCAGGCGCCCTTGCTACAGGCCGAAGAGTTGCCCGCGGCCATCAAGAAGC TCGAAGCCAAGGGTGCGAAAATCGTCGGCACGTTCGACGCCCCGGACGGGTTGCGCGGGTATGCCGCGCAATACCAGAACCGTGGCATGACGCTGTACCT GACACCGGACGGACAACATGTCCTGCTGGGCAACCTGTACGACGCCGATGGCAAGGACCTCAGCGCAGAACCACTGCAAAAGATGGTCTATGCGCCCATG GCCAAGGCGATCTGGGCCAAGATGGAAGGCAGCAACTGGATCCCCGACGGCAGCAAGGACGCACCACGCACGGTGTATCTGTTCAGCGATCCGAACTGCC CGTACTGCAACATGTTCTGGGAGCAGGCACGGCCATGGGTCAAGGCCGGCAAGGTGCAACTGCGCCATATCATGGTCGGCATCATCCGCGAAGACAGCCC GGGTAAATCAGCCGCGCTGTTGGCGGCCAAGGACCCGGAGAAAGCCCTGGAATCCCATGAAAAAGCCGGCAAGGGCAGCGCACTCAAACCCCTGAAGGAC ATCCCCCCGGCCATCCAGGCAAAACTGGACGCCAACCAGCAATTGATGGACGAACTGGAACTGTCCGCCACCCCGGCGATTTTCTATATGGACGACAACG GCGAACTGCAGCAGCAACAAGGCGCGCCCTCGCCGGACAAACTGGTGAAGATCCTCGGGCCGAAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TATCGACTCCGAAGACCCCATCGCGAGCAGGCTCGCTCCCACAGTTTTAACTGTGTTTGCCAATTCTGCGTCGTTGCAATCCCCTGTGGGAGCGGGCTTG CTCGCGAAAGCGGTGGGTCAGCGGCGCAGGAATTCGAGCAATGCAGCGGTCACGAATTCCGGGTTCTCCAGGTTGGAGATATGCCCTGCTTCCGGGATCA GGACAGAGCGACAACCGATCAGCTCGGCCATTTCCTTGGCCTCCGACGGTGGGCGCGGTTTGTCCTGGTCACCGCACATCACCAAGGTGTTTTTGGCATC GAGTCCGGGCAGGCGCGAGAGGATATCGTCCCGTCCGAAAATGATCCGCCCCAGCGGCACGATGCTGTCGCGCAAGCGATCAGCCGGCAGCGCAGCCAAC GCAGCGCGAAATTGCTGGTAGAGCGGCGACTGCGGATCGATACCCGGCCGGAAAAAGATCGGCACGACGATGTCCAGCAAGGGTTCGGGAATGCTGCCGC
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Amino Acid Sequence |
>dihydroneopterin aldolase
MPRLRHLLTLAVAAALSQAPLLQAEELPAAIKKLEAKGAKIVGTFDAPDGLRGYAAQYQNRGMTLYLTPDGQHVLLGNLYDADGKDLSAEPLQKMVYAPM AKAIWAKMEGSNWIPDGSKDAPRTVYLFSDPNCPYCNMFWEQARPWVKAGKVQLRHIMVGIIREDSPGKSAALLAAKDPEKALESHEKAGKGSALKPLKD IPPAIQAKLDANQQLMDELELSATPAIFYMDDNGELQQQQGAPSPDKLVKILGPK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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