Pseudomonas fluorescens Q2-87, PflQ2_3652 (ccoP)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens Q2-87 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCTCCAAGCGTACCGGCCCGGACCTGGCCCGTGTTGGCGCCCGCTACTCCGACGATTGGCACCGTGCGCACCTGTATAACCCGCGCAACGTGGTGCCCG AGTCGAAGATGCCGGCCTACCCGTTCCTCGTGGAAAACAAGCTCGACGGCAAAGACACCGCCAAGAAAATGGAAGTCCTGCGCACCCTGGGCGTGCCTTA CACCGACGAAGACATCGCCGGTGCCAAGGATGCCGTGAAGGGCAAGACTGAAATGGACGCGCTGGTGGCCTATCTGCAAGGCCTGGGCACCATCATCAAA AGCAAACGGTGATTGTTAATGGATATCGGGATGATTCGAGGCCTGGGCACCGTCGTTGTGATGGTGGCCTTCATCGGCCTGGCCCTGTGGGTGTTCAGCC CCAAGCGCAAGTCGGAGTTTGACGACGCGACCCTGCTGCCGTTCGCGGATGATCCCGAAGCCATCAAGCACGTCGAGCAAGCTTCTAGGAGTAACAAAGA
|
|
| DNA Sequence for Gene |
>PflQ2_3652
|ccoP
ATGACTACGTTCTGGAGTCTGTACGTCACAGTCCTCAGTCTGGGTACGATCTTCGCCCTGACCTGGCTGCTGCTGTCGACCCGCAAGGGCCAGCGCGCCG AACAAACGGACGAGACCGTTGGCCACTCGTTCGATGGCATCGAGGAGTACGACAACCCTCTGCCGAAATGGTGGTTCATGCTGTTCGTGGGCACCATCGT GTTCGCCCTCGGCTACCTGGCGCTCTACCCCGGCCTGGGCAACTGGAAAGGCCTGCTGCCAGGTTATAACTACCTGGACACGGAAAAGCAGACCGCCTTC GCCAACGGCCAGACCGGCTGGACAGGCGTTCATGAGTGGGAAAAGGAAATGGCTCGCTCGGACGCCAAGTTCGGTCCGATCTTCGCCAAGTTCGCCTCCA TGCCGATCGAAGAAGTCGCCAAGGACCCGCAAGCCTTGAAGATGGGGGGCCGCCTGTTTGCCTCCAACTGCTCGGTCTGCCACGGTTCCGACGCCAAGGG CGCCTACGGTTTCCCTAACCTGACCGACGCCGATTGGCGTTGGGGCGGCGAACCGGAAACCATCAAGACCACCATCATGGGCGGTCGTCACGCAGTGATG CCTGGCTGGGCTGCCGTCGTTGGCGAACAGGGCGTGGCCGACGTGGCTTCCTACCTGGTCACCAGCCTGCACGGTCGCAAGCTGCCGGAAGGCGCCAAGG CCGATCCGGCCAACGGCCAGAAGCTGTTCGCTGCCAACTGCGTGGCCTGCCACGGTCCGGAAGGTAAAGGTACGCCCGCCATGGGCGCACCGAACCTGAC GCATCCAGCCGCGTTTATCTACGGCTCGAGCTTCGCCCAACTGCAGCAGACCATCCGCTACGGCCGCCAAGGCCAGATGCCTGCCCAGGCCGATCTGCAG GGCAACGACAAGGTCCACTTGCTGGCCGCCTATGTCTACAGCCTGTCCCACGGCGAAAAGGCTCCTGCGGCTGACGCCCAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AGCCCGCTGCCGATGTACGAAAGGCCCCGTCAACCAACGTTGACGGGGCCTTTTTATTTACCGCAGCGATATGGTCAGATTGTTATCTTGCCCGCAAGCA GCGGCGGTAGTAACGTGCCTACATTAAAGTTTCTTGAGGACGCCGCCATGTCCATCACCACGATTTCCAGCCGCGAATTCAATCACGACACAAGTGGTGC CAAAAAAGCCAGTCGCGAGGGGCCGGTCATCATCACCGACCGTGGCAAGCCGGCTCATGTACTGCTAAGCATTGAGGAGTACCAAAAACTGACCGGCCTT GGCAGCAGCATCGTCGAGTTGCTGGTCATGCCCGATACGCCGGATATCGATTTCGACACCGAGCGTGCCGTCATCACGCCTCGACCGGTGGACCTGTCCT GATGTACCTGCTCGATACCCATGTCATTTCAGAATTACGCAAACCTCAAGCCGATAAAAACGTACAGGCCTGGGCGCGTAGCGTCCCCGCCCCCAGCCTC
|
|
| Amino Acid Sequence |
>cytochrome CBB3
MTTFWSLYVTVLSLGTIFALTWLLLSTRKGQRAEQTDETVGHSFDGIEEYDNPLPKWWFMLFVGTIVFALGYLALYPGLGNWKGLLPGYNYLDTEKQTAF ANGQTGWTGVHEWEKEMARSDAKFGPIFAKFASMPIEEVAKDPQALKMGGRLFASNCSVCHGSDAKGAYGFPNLTDADWRWGGEPETIKTTIMGGRHAVM PGWAAVVGEQGVADVASYLVTSLHGRKLPEGAKADPANGQKLFAANCVACHGPEGKGTPAMGAPNLTHPAAFIYGSSFAQLQQTIRYGRQGQMPAQADLQ GNDKVHLLAAYVYSLSHGEKAPAADAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|