Pseudomonas fluorescens Q2-87, PflQ2_2789 (aprF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens Q2-87 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTGAAGTCCGCCGGATTCGAGTTGCAGCACAGCGAAATCCTCGCCACCGCCGACGGCATCGCCGTCAACCTGGGGGTGCACACCGAAGGGGCGGTGGTGC GCCAGGGCGATACCTTGCTGGAGATCGTGCCCCAAGGCACGCGCCTGGAAGTGGAGGGGCACCTGCCGGTCAACCTGATCGACAAGGTCGACGCCCATTT GCCAGTGGACATCCTCTTCACGGCCTTCAACCAGAACCGCACACCACGCGTGCCCGGGGAAGTCAGCCTGGTTTCAGCCGACCAGATGGTCGATGAGAAG ACCGGCGCGCCGTATTACGTCCTGCGCAGCAGCGTCAGCGACGTGGCGATGGAAAAGCTCAACGGCCTGATGATCAAGCCCGGGATGCCGGCTGAGATGT TCGTGCGCACCGGCGAGCGCTCACTGCTCAATTATCTGTTCAAACCGCTGCTCGACCGAGCCGGCTCTGCGTTGACCGAAGAATAAGGATATCCGGCGGT
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| DNA Sequence for Gene |
>PflQ2_2789
|aprF
ATGAAGCGTTTCCAATGGTGGGCCGTGCTGGCCCTGTCCGTGTGCAACAACGTCTGGGCCATGGGCCCCTTTGAGTTCTATGAGCAGGCGCTGCGTAATG ATCCGGTCTACCTCGGCGCGATCAAGGAGCGCGACGCAGGCCTTGAGAACCGTGCCATCGGCCGCGCCGGCCTGCTGCCGCACCTGGGCTACAGCTACAA CAAGGGCCGCAACCAGTCCAAGGTCACCTACCTCAACGATCGCGGCGCCAGCCAGCACGACGATCGCAACTACAGCAGCTACGGCTCCAGCCTGACCCTG CAACAACCGTTGCTGGACTACGAGGCGTATGCCGCTTATCGCAAAGGCGTGGCCCAGGCACTGTTCGCCGACGAAAACTTTCGCGGCAAGAGCCAGGAAT TGTTGGTGCGGGTGCTGAGCCAGTACACCCAGGCGCTGTTCGCCCAAGACCAGATCGACATCGCCCAGGCGAAGAAGAAGGCGTTCGAACAGCAGTTTCG GCAGAACGAGCACCTGTTCCGCCAGGGCGAAGGCACGCGCACCGACATTCTCGAGGCGCAGGCGCGCTACGAGCTGGCGATCGCCGAAGAGATCGAGGCC CGAGACGAACAGGACGCTTCCCTGCGCGAGCTTGGCGCGCTGATTGGCGTGCCCACCCTGGACATTGGCGACCTGGCCCCCCTCAACGACACCTTCCAGA CTTTTGCGTTGCAGCCGGCCACTTTCGACACTTGGCACGAGATGGCGGTAAGCAACAACCCGAACCTGGCGTCGCAGCGCCAGGCCGTGGACGTGGCGCG CTTCGAGGTGGAGCGCAACCGCGCCGGCCACCTGCCCAAAGTCAGCGCCTACGCGACGATGCGCCAGAACGAATCGGAAAGCGGCAACACCTATAACCAG CGCTACGACACCAACACCATCGGCCTGGAAGTCAGCGTGCCGCTCTATGCCGGCGGCGGGGTCTCGGCGTCGACCCGCCAGGCCAGCCGCACCATGGAAC AGGCTGAATACGAACTGGATGCCAAGACCCGTGAGACGCTGATCGAGCTGCGCCGCCAGTTCAGTGCCTGCGCGTCGGGCGTGAACAAGCTCAAGGCCTA CCAGAAAGCCCTGGCCTCGGCCGAGGCACTGGTGGTGTCGACCCGGCAAAGCATTCTCGGCGGCGAGCGGGTCAACCTCGACGCCCTCAACGCCGAGCAG CAGCTCTACACCACTCGTCGCGACTTGGCCCAGGCTCGCTACGACTACCTCATGGCCTGGACCAAGTTGCATTACTACGCCGGCACGTTGGGAGCCCAGG ACCTGGCGAAGGTGGATGAAGCGTTTGTGGCGCAAGGGCGCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGGCTGCCGCTGTGACAGGGGCAGGGCAAACCAAAGGTTTTTGGCAACAACTTTGGCAATCACTAAGGAAGGTTCGGATGAAACACAAAAAACAACCCG GGCAAACGGGCCGGCTGTTTCTGTTGAAAACCCTCAACCACGCCATGCTCTGCGCCCTGGCGACCCTCGGTACGGCCCACGCCGCGCCGTATGTCGAGAG CGGCAGGCCGGGGAATCCGGACAGCTGGCGCAGCAGTGAATTCAATGCCGAATGGGGCCTTGGGGCGGTCAACGCCCAACAAGCCTACGCCGCCGGCTAC ACCGGCAAGGGCGTCAAATTGGGGATCTTCGACCAACCCGTCTACGCGGCACATCCGGAGTTTTCCGGCCCCAACAAGGTCGTGACCATGGTCACCAGCG GCATCCGCCAATACACCGACCCGTACATCCCGGTAAAGGCCGGTGATCCGTTCCGCTACGACGGTTCACCCACGGTGGGTTCCGATGGCAAGTTGGGCTC
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| Amino Acid Sequence |
>peptidase
MKRFQWWAVLALSVCNNVWAMGPFEFYEQALRNDPVYLGAIKERDAGLENRAIGRAGLLPHLGYSYNKGRNQSKVTYLNDRGASQHDDRNYSSYGSSLTL QQPLLDYEAYAAYRKGVAQALFADENFRGKSQELLVRVLSQYTQALFAQDQIDIAQAKKKAFEQQFRQNEHLFRQGEGTRTDILEAQARYELAIAEEIEA RDEQDASLRELGALIGVPTLDIGDLAPLNDTFQTFALQPATFDTWHEMAVSNNPNLASQRQAVDVARFEVERNRAGHLPKVSAYATMRQNESESGNTYNQ RYDTNTIGLEVSVPLYAGGGVSASTRQASRTMEQAEYELDAKTRETLIELRRQFSACASGVNKLKAYQKALASAEALVVSTRQSILGGERVNLDALNAEQ QLYTTRRDLAQARYDYLMAWTKLHYYAGTLGAQDLAKVDEAFVAQGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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