Pseudomonas fluorescens Q2-87, PflQ2_1143
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens Q2-87 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCCTGCGCGCGTTTGCCCGCCGAGGCGACGACCAGGGCCGGGCGAGCCTGGGCAAGGCCGTCGCGGCCGCCCTGCAACTGCTGGGCGGGCGCCTTGAAC ACCTGGATATCGAAATCCACAACGGTTTCGACGACGTCCAGCTGCAAATCGACCAGACGCGCCTGGAGCAGATCCTGGTGAACCTGATCGGCAATGCCCT GGACGCCATGCAGGCCCAACCCGAGCCGCGGCTGTGGCTCGAAGGCGAAATCAGCGACGGCAAATATCGCCTGCGGGTGCGCGACAACGGCCACGGCATC GATCCGCAGGCACGCAAGCACCTGTTCGAACCGTTCTTCACCACCAAGCCCGGCGAACAGGGGCTGGGCCTCGGCCTGACGCTTTCGGCGAGCCTGGCCG CAGCCGCCGGCGGACACCTGGGTGTCGAGTATCCGGTTGAGCGTGGCACCATTTTTGTCCTCAGTTTACCGTTGGTAAGCCTTTCTCCTGCCGAGCCGCT
|
|
| DNA Sequence for Gene |
>PflQ2_1143
ATGAACAACGACCTGAGCGTATTGATCGTCGAAGATGATCCCCATGTCCTGCTGGGCTGCCAGCAAGCCCTGAGCCTGGAAGACATTCCTTGCATCGGCG TGGGCAGCGCCGAAGAGGCCCTGGAGCGAGTCGACGATAACTTCGCCGGCATCGTCATCAGCGACATCCGCCTGCCGGGCATCGATGGCCTGGAGCTGCT GACACGCCTCAAGGCCCGGGATCGCAGCCTGCCGGTGGTGCTGATCACCGGCCACGGCGACATCTCCATGGCCGTCGGCGCCATGCAAAAAGGCGCTTAT GACTTCATGGAGAAACCCTTCTCCCCGGAGCGCCTGGTGGACGTCGCCCGTCGCGCCCTGGAACAGCGCAGCCTGGCCCGCGAGGTTTCATCGCTGCGCC GGCAATTGGCCGAACGCGACTCCCTGGAAGGCCGGATCATCGGGCGCTCGCCAGCCATGCAACACCTGCGAGCGCTGATTGCCAACGTCGCCGACACCTC GGCCAACGTGCTGATCGAAGGCGAGACCGGCACCGGCAAGGAACTGGTTGCCCGTTGCCTGCACGACTTCAGTCGACGCCACGATAAGCAATTCGTCGCG CTGAACTGCGGCGGCCTGCCGGAAAACCTCTTCGAAAGCGAGATTTTCGGCCACGAGGCCAACGCCTTCACCGGTGCCGGCAAACGCCGGATCGGCAAGA TCGAGCACGCCGATGGCGGCACGCTGTTTCTCGATGAAGTGGAAAGCATGCCCCTGCCCTTGCAGATCAAGTTGCTGCGGGTGTTGCAGGAACGCACCCT TGAACGCCTGGGCTCGAACCAGAGCGTGGCCGTCGATTGCCGGGTGATTGCCGCGACCAAATCCGACCTGGACGAAATGAGCCGCGCCGGGCAGTTTCGC AGCGACTTGTATTACCGCCTCAACGTGGTGACCCTGGAACTGCCGCCCCTGCGCGAGCGCCGCGAGGACATCCTGCAATTGTTCGAGCACTTCCTCCAGC AGTCGTCCCTGCGCTTCGACCGCACGGTGCCACAGCTGGACAACCAGACCCTGTCGAACCTGATGAGCCACGACTGGCCAGGCAACGTGCGCGAACTGCG CAACGTCGCCGAACGTTATGCCCTCGGCCTCCCCGCCTTCAAAAGAGCCGGCGCCAGCAGCGGCAACCAGAGCCTGGCCTTCGCCGAAGCCGTGGAAGCG TTCGAACGCAACCTGCTGGTGGACGCGTTGCAACGCAGCGGCGGCAACCTGACCCAGGCCAGCCAGGAACTGGGCATGGCCAAGACCACGCTGTTCGACA AAGTCAAAAAATATGGCCTGAGCCATTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGGACGGTGGATTTGTGGATCTGATTTTCAAAGCAGCGCTGGGTGCAGCCGTGGTGGTCATCCTGGCGATGCTGGCCAAGACCAGGAATTATTACATCG CAGGGCTGGTGCCGCTGTTCCCGACCTTTGCCCTGATCGCCCACTACATCGTCGGCAAGGGCCGTTCGGTCGACGAACTGAAGACCACCATCGTGTTCGG TATGTGGTCGATCATTCCTTATTTCGTGTACCTGGCGACACTCTATGTGATGGTCGATCGCATGCGCCTGGAGACGTCACTGGCCGTAGCGGCGGTGGCG TGGCTGATGGCGGCGACCGTGCTGGTCAGCGTCTGGGTGAGGGTTCACGGCTGAATCGGGAAGAATGTGGGAGCGAGCGTGCTCGCGAAAGCGCCGGGTC AGCTTGCATCGATGCAGGATAAGACGGCCCCTTCGCGAGCAAGCCCGCTCCCACACGGACTCGCGACGTGGTGGATCAGTAGCCGACGGTGTAGCGCGCG
|
|
| Amino Acid Sequence |
>Fis family transcriptional regulator
MNNDLSVLIVEDDPHVLLGCQQALSLEDIPCIGVGSAEEALERVDDNFAGIVISDIRLPGIDGLELLTRLKARDRSLPVVLITGHGDISMAVGAMQKGAY DFMEKPFSPERLVDVARRALEQRSLAREVSSLRRQLAERDSLEGRIIGRSPAMQHLRALIANVADTSANVLIEGETGTGKELVARCLHDFSRRHDKQFVA LNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHADGGTLFLDEVESMPLPLQIKLLRVLQERTLERLGSNQSVAVDCRVIAATKSDLDEMSRAGQFR SDLYYRLNVVTLELPPLRERREDILQLFEHFLQQSSLRFDRTVPQLDNQTLSNLMSHDWPGNVRELRNVAERYALGLPAFKRAGASSGNQSLAFAEAVEA FERNLLVDALQRSGGNLTQASQELGMAKTTLFDKVKKYGLSH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|