Pseudomonas fluorescens Q2-87, PflQ2_0136 (clpV1)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens Q2-87 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTACAGCGGTCACCTGTCGGCCCAAACCCGCTACCCGGACGGCTTGAAAGCCATTCTCGGTGAATATTTCGGGCTGCCGGTGGAGATCGAAGAATACGTC GGCCAATGGCTGGAACTGCCGGAACGCAGCCGCGTCGGTGTCAGTGCTCATCAGCTGGGCATGGACTTCTGCCTGGGCCGCTATGTGTGGGATCGCCAGC ATAAATTCCGCATTCGCCTGGGGCCGCTCAAGCTCGTCGACTACATGGACATGCTGCCCGGCAGCCAACCGTTCAACGAGCTGGTGGCCTGGGTCGCCGA ATATCTTGGCCACGAACTGGACTGGGACCTGAACCTGGTCCTGGAGCAGCCCGAGGTCCCGGCGCTACAACTCAATGGTCGTTTCCGCCTGGGTTTCAAC ACCTGGCTGGGACGTCCCGAAACAGATGCCAACGATCTAATACTGGCCCGGCATTATGCCGAACAGGCCAACACCTCACAGACCTCAAGGAGCCATGAGC
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| DNA Sequence for Gene |
>PflQ2_0136
|clpV1
ATGGGTGAAATCAGTCGCGCCGCGTTGTTCGGCAAACTCAACAGCGTGGCCTACAAAGCCATCGAAGCCGCCACCGTGTTCTGCAAGTTGCGCGGTAACC CTTATGTGGAACTGGCCCACTGGTTTCATCAGCTGTTGCAACTGCAGGACTCGGACCTGCACCGCATCATCCGCCAATTCAACATCGAGCCGGCACGCCT GGCCCGCGACCTGACCGAAGCCCTGGACCGTTTGCCACGGGGGTCGACCTCGATCACCGACTTGTCGTCCCACGTGGAAGAAGCGGTTGAACGCGGCTGG GTCTACGGCAGCCTGATGTTCGGCGAAAGCCAGGTGCGCACCGGTTATCTGGTGCTGGGCATTCTCAAGACGCCAAGCCTGCGCCACGCGCTGCTGGGGC TGTCGTCGGAGTTCGACAAGGTCAAGGCAGAAGCCTTGAGCGAGCGTTTTGACGAATACGTCGGCGATTCCCCGGAGAACGCCCTGACCGCCAGCGACGG TTTCAATGCCGGCGCCGTGCCGGGCGAAGCCAGCGGCGCCATGGCCCCCAGCGCCATGGGCAAACAGGAAGCCCTCAAGCGCTTTACCGTCGACCTCACC GAACAAGCCCGCAGCGGCAAGCTCGACCCGATCGTCGGGCGCGACGAAGAGATCCGCCAATTGGTGGACATCCTCATGCGCCGTCGGCAGAACAACCCGA TCCTCACCGGTGAAGCCGGCGTGGGCAAGACGGCGGTGGTCGAAGGCTTTGCCCTGCGCATCGTCGCCGGCGACGTGCCACCGGCCCTCAAGGACGTCGA ATTGCGCAGCCTAGACGTTGGCCTGTTGCAGGCCGGCGCGAGCATGAAAGGCGAATTCGAACAGCGCCTGCGCCAGGTCATCGAGGACGTCCAGGCCTCG CCGAAACCGATCATCCTGTTCATTGACGAAGCCCACACCCTGGTGGGGGCCGGTGGCGCAGCCGGTACGGGCGACGCCGCCAACCTGCTCAAGCCAGCCC TGGCCCGCGGTACCTTGCGCACCGTGGCCGCCACGACTTGGGCCGAGTACAAGAAGCACATCGAGAAAGACCCGGCCCTGACCCGTCGCTTCCAGGTGGT ACAAGTGGCCGAGCCGTCGGAAGACAAGGCTTTGCTGATGATGCGCGGCGTGGCCTCGACCATGGAAAAACACCACCAGGTGCAGATCCTCGACGAAGCC CTGGAAGCCTCGGTCAAGTTGTCCCATCGCTACATCCCCGCGCGCCAGCTGCCGGACAAATCCGTGAGCCTGCTGGACACCGCCTGTGCCCGCGTCGCCA TCAGCCTGCACGCCGTGCCGGCCGAAGTGGACGACAGCCGCCGACGCATCGAAGCACTGGAAACCGAGCTGCAAATCATCGCCCGCGAACACGCGATTGG CGTCGCCATCGGCACGCGCCAGACCCAGACCGAAGGCCTGCTGAGCGCCGAGCGCGAGCGCCTGGCCGAGCTGGAAAGCCGCTGGGCCGAAGAAAAAACC CTGGTGGACGAATTGCTTGAAACCCGCGCCACCCTGCGCGAGCGCGTCGGCGTGGTGGACAGCGAAGACGGCAGCGAAACCAGTCATGACCTGCGCGAGA AATTGGTGGACTTGCAACAGCGCCTGACCACCCTGCAAGGCGAAACCCCGCTGATCTTGCCGACGGTGGATTACCAGGCCGTGGCCTCGGTGGTCGCCGA CTGGACCGGTATCCCGGTGGGTCGCATGGCCCGCAACGAGCTGGAAACCGTGCTCAACCTCGACCAGCACCTGAAGAAACGCATCATCGGCCAGGACCAT GCCCTGCAGATGATCGCCAAGCGCATCCAGACCTCCCGCGCCGGCCTCGACAACCCGAGCAAGCCGATTGGTGTGTTCATGCTCGCCGGCACCTCCGGCG TGGGCAAGACCGAAACCGCCCTGGCCCTGGCCGAAGCCATGTACGGCGGCGAGCAGAACGTCATCACCATCAACATGAGCGAGTTCCAGGAAGCCCACAC CGTGTCCACCCTCAAGGGTGCGCCACCGGGTTACATCGGCTATGGCGAAGGCGGCGTGTTGACCGAAGCCGTGCGGCGCAAACCGTACAGCGTGGTGCTG CTGGACGAGGTGGAAAAAGCCCACCCGGACGTGCATGAAATCTTCTTCCAGGTGTTCGACAAAGGCGTGATGGAGGACGGCGAAGGCCGGGTGATCGACT TCAAGAACACCTTGATCCTGCTGACCACCAACGCCGGCACCGAGCTGATTGCCCAAGTCTGCAAAGACCCGCAGAACGTGCCCGAGCCCGAGGAAATCGC CAAGGCCTTGCGCCAGCCGCTACTGGAGATTTTCCCGCCGGCCCTGCTCGGCCGCCTGGTGACGATCCCGTACTACCCGCTCAGCGACGAGATGCTCAAG GCCATCACCCGCCTGCAACTCAACCGCATCAAGAAGCGCGTGGAGAGCACCCACAAGGTCGCCTTCGACTACGACGACGCGGTGATCGACCTGATCGTCT CGCGCTGCACCGAGACTGAAAGCGGCGGCCGCATGATCGACACCATCCTGACCAACAGCCTGCTGCCGGACATGAGCCGCGAGTTCCTGACCCGCATGCT CGAAGGCAAGGCCCTGGCCGGCGTGCGGATCAGCGCTGTGGATAACGAATTGCAGTACGACTTCAGCGACGCGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CACCGAAGGAACACCGCATAACCCTGTGGGAGCGGGCTTGCTCGCGAATGCAATCTGTCAGTGCCATTGATGTCGCCTGACACACCGCCTTCGCGAGCAA GCCCGCTCCCACAGTTGTTCCGGTGTCGTCAGGCGATCAGCGGCGCAGCCATTACAACGATGAGATAGACGATGTTATTCAACCAAGCCACACGCCTCGC CAAGATCACCAGCCCCCTGGGGCCCGAGGTGCTGTTGCTCAAGGACATGGGCGGCGGTGAAGAGCTGGGGCGGCTGTTCAACTATGAGTTGCAGTTGCAC TCGCTGGACAACGCCATCGATCTCAACCAATTGCTTGGCAAACCCATGTGCGTGAGCCTGCAACTGGACGGCGGTGGCGAGCGCTATTTCCACGGCATCG TCGCGCGCTTCAGCCAGAACGTCGACCAAGGCCAGTTCGCCAGTTACCAGGCGACGTTGCGCCCCTGGTTCTGGTTAATGACCCGCACCTCCGACTGCCG
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| Amino Acid Sequence |
>ATPase AAA
MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQFNIEPARLARDLTEALDRLPRGSTSITDLSSHVEEAVERGW VYGSLMFGESQVRTGYLVLGILKTPSLRHALLGLSSEFDKVKAEALSERFDEYVGDSPENALTASDGFNAGAVPGEASGAMAPSAMGKQEALKRFTVDLT EQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAGVGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPALTRRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQILDEA LEASVKLSHRYIPARQLPDKSVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGVAIGTRQTQTEGLLSAERERLAELESRWAEEKT LVDELLETRATLRERVGVVDSEDGSETSHDLREKLVDLQQRLTTLQGETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDH ALQMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVL LDEVEKAHPDVHEIFFQVFDKGVMEDGEGRVIDFKNTLILLTTNAGTELIAQVCKDPQNVPEPEEIAKALRQPLLEIFPPALLGRLVTIPYYPLSDEMLK AITRLQLNRIKKRVESTHKVAFDYDDAVIDLIVSRCTETESGGRMIDTILTNSLLPDMSREFLTRMLEGKALAGVRISAVDNELQYDFSDAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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