Pseudomonas synxantha BG33R, PseBG33_5196

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas synxantha BG33R chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACTATTCCGACCTGCCAGCGGCGCGCCTGACCGGCATGACGCGCTTTGCCACGTTCTGGGTGGAAAACGGCGAAATCAAGGCGCCGGTCAGCACCATGCG CTTTGATGACAGTGTGTATCACTTGCTCGGTTCTCAGCTCGAAGCCCTGACCGCTGATCGGGAACTGCTACTGTCGGCCAGCACTTACAGCCAGCGCAAT ACCGCCTCCAACCTGCTGCCAGGTGCCTTGGTCAAACGCCTGACCTTGACATTGTAAACCCCGGTAATCCGGCCCTCTGTAGGCGCGAGCGCACCCGCGC CTACAGAGGGAATTGCACCCTCTCAGTCAGACTTTTCGCCGTTTCCTACCGCAAATTCCCAACTCACCGTCTTGAGCGCCCGGTTGGTTGTCGCCTGTAA AAAACCTCGTTATAACGGTTAGTGGCATCCCGCCACCCCACCCACGTGCCCGCACGTGATGCATGACCTTGCCCGGTAAACGGCAAGCTGGAGCGCTGAT
DNA Sequence for Gene
>PseBG33_5196
ATGAACCATGGAAGTTTCGTCATTGAAAGGCTGTTCAAACACTACAACGTTCACGTAGAGCAGCTCGGTAATAACCCGCAAAGAAAAACCGTGCTGATGG TCAATGGCGCCCTGTCCACCACGCGTTCCTTTGCCCGCACCAGCAAATGCCTGGCCGAGCATTTCAATGTGCTGCTGTTCGATTTGCCATTCTCCGGCTA CTCGCGCGAGCACAACACCGACCTCGACTTGGTTACCAAGGACGATGAGGTGCAAATCCTGCGCGCCCTGGTAGAGCGCTTTGAGGTCAACCATTTAGTG TCCGCCTCGTGGGGCGGCATCTCCACATTGCTGACCCTGGCGCACAACCCACCCTCCATCGAAAGCTCCGTGGTGATGGCCCTGGCCCCCAACCTCAATC AGGCCATGCTTGAATACGTGGAGCGCGTGCGCGTGTTGATCGAGGCCGATGACAAGTCCGCGGTCGGCCACCTGCTCAACGAGACGGTCGGCAAATACCT GTCGCCGCGCCTCAAGCGCAACAACCATCGGCACCTGTCGACCATGGCCACTACCGAGTACCGCCAGGCGCGCTTTCACATTCACCAGGTCCTGGCCTTG GGCGATGGCAACTATTTGCCGGCGCTGCGACAGATCGAGACGCCGGTGCACTTTCTCAACGGTGCCCTGGACGAATACACCCCGGCCGCCGAGGCCCAGC TGTTCAAACAATATGTAGGCCGCAGCAGCTTTGCGGTGGCCGAGCATACCGGCCACCTGCTGGACCTGGAGTCTCGGGAAGCGGCGCTGGCAGTTCACCG TGCATTGCTGGATTTCCTGGTCGGAGAGCACGCAACGTTGTCGGACTTAGACGAACCGCCAGTGGGAAAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGACGAATGGCGCATAATCGCCAACACATAGCCTGCTAATAAAAGGGTCCCCATGCCGAATCGTGCCCCTCTCGATGCCAAGACCGCCCGCTGGCTCCC CTGGGTGGTAGCGATTGCCTTCTTCATGCAATCGCTGGATGGGACGATCCTCAACACGGCTCTGCCGGCCATGGCCCGGGACCTCGCGGAGAACCCGCTG CGCATGCAGGGGGTGGTGATTGCCTACATGCTCACCGTCGCCCTTCTGATCCCCGCATCCGGTTGGATCGCCGACCGTTTTGGCACCAAGAAGATTTTCT TTGGCGCGATCATGCTGTTCAGTCTCGGCTCGCTGCTGTGCGCACTGTCCAGCAGTTTGACCATGCTGGTGGGCGCCCGGATAATCCAGGGCTTGGGCGG TGCGCTGATGCTGCCAGTCGGGCGGCTGGTGGTGCTGCGCGCCTATCCGCGTTCCGAGCTGGTGCGCATCATGGGTTTCATCACTATCCCCGGCCTGCTC
Amino Acid Sequence
>rhamnosyltransferase
MNHGSFVIERLFKHYNVHVEQLGNNPQRKTVLMVNGALSTTRSFARTSKCLAEHFNVLLFDLPFSGYSREHNTDLDLVTKDDEVQILRALVERFEVNHLV SASWGGISTLLTLAHNPPSIESSVVMALAPNLNQAMLEYVERVRVLIEADDKSAVGHLLNETVGKYLSPRLKRNNHRHLSTMATTEYRQARFHIHQVLAL GDGNYLPALRQIETPVHFLNGALDEYTPAAEAQLFKQYVGRSSFAVAEHTGHLLDLESREAALAVHRALLDFLVGEHATLSDLDEPPVGK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site