Pseudomonas synxantha BG33R, PseBG33_3979
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas synxantha BG33R chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGTATTGACCGGCAACGGCAAAGGCAAGAGCAGTTCGGCCTTCGGCATGTTGGCCCGCGCCATGGGCCACGGCATGCAGTGCGGTGTGGTGCAGTTCA TCAAGGGCCGCAACAGCACAGGCGAAGAGCTGTTCTTTCGGCGCTTCCCCGAGCAAGTTCGCTTCCACGTCATGGGCGAAGGCTTCACCTGGGAAACCCA GGATCGTCAACGCGATATCGCCGCCGCCGAAGCAGCCTGGGCGGTGTCGCGGGCAATGCTCAATGACCCTTCCATTGGCCTGGTGGTGCTGGATGAACTG AACATCGCTCTCAAGCACGGCTACCTCGACCTGGACCAGGTGCTAAGCGACCTGCAAGCCCGCCCGCCGATGCAGCATGTGGTGGTCACTGGCCGTGGTG CCAAGCCTGAATTGATCGAAATGGGCGACACCGTCACCGAAATGGGCATGCTCAAGCACGCCTTCCAGGCCGGTATCAAGGCACAGAAGGGCGTCGAACT
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| DNA Sequence for Gene |
>PseBG33_3979
TTGAATCAGCCCCGTCATTGCCCGGCCTTCTTGATCGCCGCTCCGGCGTCCGGCCAGGGCAAAACCACGGTCACCGCCGCGCTGGCCCGTTTGCATCGCA ACCTGGGGCGCAAGGTGCGCGTGTTCAAATGCGGGCCGGACTTTCTCGACCCGATGATCCACGAGCGCGCCAGCGGGGCGCCGGTGTATCAATTGGACAT GTGGATGGTGGGCGAGCAGGAAAGTCGTCGTCTGCTGTGGGAAGCGGCGGGGGAGGCTGACCTGATCCTCATCGAAGGCGTGATGGGGCTGTTCGACGGC ACCCCCTCCAGCGCCGACCTGGCGCGGCACTTCGGCGTGCCTGTGCTGGGGGTGATCGACGGGACTGCCATGGCCCAGACCTTTGGTGCCCTGGCCCTGG GCCTTGCGCGCTATCAGCCCGACCTGCCGTTCGCCGGCGTGCTGGCCAACCGTGTCGGCACCCTGCGCCATGCCCAGTTGCTCGAAGGCAGCCTCACCGA GGGCTTGCGTTGGTACGGCGCGTTATCCCGCGAGACCGGTATCGAACTGCCGAGCCGCCATTTGGGCCTGGTGCAAGCCAGCGAACTCAATGACCTCGAT GTACGCCTGGATGCTGCTGCCCAGGCATTGGGCAGTAGCTGCGAAGTGGCCCTGCCGCCGCCCGTGACCTTTGCCGCGCCCGAAGTGATCAAGGCCGAAC CGTTACTTGCCGGTGTGCGTATCGCCGTCGCCCGTGACGAAGCCTTTGCTTTTACCTATGGCGCCAGCCTGGATTTGCTGCGGGCCATGGGTGCCGAGCT TGAGTTTTTCTCACCTATCCATGATCGCCAACTGCCGCAGGCAGACAGCCTTTACTTGCCAGGCGGGTATCCGGAACTGCACCACCAGGCGCTGTCGGCA AACACCTCGATGCTGGAGGCCATCCGTGCTCATCACGCCGCCGGCAAGCCACTGCTCGCCGAATGTGGCGGCATGCTCTATCTGCTCGATTCGCTGACGG ATGTAGAGGGCGACAGAGCCGAACTGGTTGGCGTGCTGCCAGGCGATGCGGTGATGCAAAAGAAACTCGCGGCCCTGGCCCTGCAAAGTGTCGAATTGCC GGAAGGCACGTTGCGCGGGCACACCTACCACCACTCCTTGACCAGCACCGCATTGGCGCCGATCGCCCGTGGCCTGAGCCCTAACGGCGGGCGCGGGGCT GAAGCGGTTTACCGACAAGGGCGGCTGACCGCTTCCTACGTGCACTTTTATTTTCCGTCGAATCCTGGCGCGGTGGCCGCGTTGTTCGCGCCAGACCTTG AGACCGCTATCGCAGGCAAGTCAGCCCCCACAGTTGACCGAGTTGAAAACCAATCCAATGTGGGAGGGGGCTTGCCCCCGATGAGGCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTGACAACGCCTTCCCCGAGGCCGACCGCCAGGCCGTCTACCGTGCCATCGCCGAACGCCGCGACATGCGCCACTTCACCGGCGGCAGCGTTGCTCCGGA ACTGTTGCACCGCTTGCTCCAGGCCGCGCACCAGGCACCCAGTGTAGGTCTGATGCAGCCATGGCGTTTTATCCGTATCAGCGACCGCCGGTTGCGCAGC CAGATCCAGCAGTTGGTGGAAGAAGAGCGCGTGCGCACCGCGCAGGCCCTGGGCGAGCGCTCCGATGACTTCATGAAGCTCAAGGTCGAAGGCATCAACG ACTGCGCCGAGGTACTGGTGGCTGCACTGATGGATGATCGCGAGCGCCACATCTTCGGGCGCCGCACCTTGCCGGAAATGGACATGGCGTCTCTATCTTG CGCAATCCAGAACCTGTGGCTGGCGGCGCGCGTGGAAGGCCTGGGCATGGGCTGGGTGTCGCTGTTCGAACCCCAGGCGTTGGCCGAACTGCTGGGTCTG
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| Amino Acid Sequence |
>cobyrinic acid a,c-diamide synthase
MNQPRHCPAFLIAAPASGQGKTTVTAALARLHRNLGRKVRVFKCGPDFLDPMIHERASGAPVYQLDMWMVGEQESRRLLWEAAGEADLILIEGVMGLFDG TPSSADLARHFGVPVLGVIDGTAMAQTFGALALGLARYQPDLPFAGVLANRVGTLRHAQLLEGSLTEGLRWYGALSRETGIELPSRHLGLVQASELNDLD VRLDAAAQALGSSCEVALPPPVTFAAPEVIKAEPLLAGVRIAVARDEAFAFTYGASLDLLRAMGAELEFFSPIHDRQLPQADSLYLPGGYPELHHQALSA NTSMLEAIRAHHAAGKPLLAECGGMLYLLDSLTDVEGDRAELVGVLPGDAVMQKKLAALALQSVELPEGTLRGHTYHHSLTSTALAPIARGLSPNGGRGA EAVYRQGRLTASYVHFYFPSNPGAVAALFAPDLETAIAGKSAPTVDRVENQSNVGGGLPPMRP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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