Pseudomonas synxantha BG33R, PseBG33_3887

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas synxantha BG33R chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCTGCATGACTGCCTGACCCTGCTGGCCTGGCAACTGGAACTGATCGACATCCGCACCGGTGAACTGAGCCTGGATGAAAGCGAGCAAACTTCATTGAT CGCAACGGTTGCCTTGCAGATCCCGCAAAAGAATTTGAGCCGTACACCGCCGCAGCATCTGCATCAGGGGTCGTAGCGTCGTGCAGGTCGTATTTAACTG TCGAGTTATCTAAAAACGACCGGCTTTGACGCAATGGGAAAATATCAATTAGCCGTCAATGTAATAATTATACAAACCAACTTCGTTAATACAACTTTCC ACTTTCAACTCTGGGATTAACGCCCAGAGTATTTGTGTGGGCCATAAACCAATCAGGCGACCAACGGTAAGCGGGGTGGTACTATGCCCCGCTCGAAGTG ATTTAACTTCAACATGCTTAAAGACGATTTGGCAGCGCACTCCAAACAGAGCCCGGTCAACCGGCCTCACCGCAGTGAACCCTCATTGGCTCCATCCGCT
DNA Sequence for Gene
>PseBG33_3887
ATGTACGCCAGTTTCAAGTCACTTATCGCCAGGTCCGTGTCCCGCAGCCATGTGCGCCGCCTCACCCTTGCGCTGTGCCTGTGCTCATTGCTGGCCAGCC TGTGGGCCTATCTGCAGGACGCGCCGCTGCCGTTGCTGATCCTGCTGCTCAACTTCGCCACGCTGGTGGTGGTGGGGCTGCAACAGTGGAATTCGCGCAA AGCCATCAAGTTCGAGCCCCAGGAACTGGCCGACCGCTTGCTGCAAGTGCAGGAGAACGAACGCCACCGGCTCAGCCGCGAACTGCATGACGATATCGGC CAACTGCTGACCGCCGCCAAACTGCAAAGCGAATGGTTGCAGCGCCGCCTGCCCCCGGACCTGAACACCCATTGCACGGTGCTGTGCAATACGCTCAATG AAACCCTGGCCAAGGTGCGCGACGTCTGCGCCATCCTCAACCCGCGCCAACTGACCAGCCTGGGTCTGGAAGCCAGCCTGCGCGCACACCTGCTCAAGAC CCTGGAAAACACCCAGGTGTGCTGGAGCCTGGAGTGCCAGCAACGGCTCACCGGCATCCCCGAAGAAATGGCCGTGGCGGCCTTTCGCATCACCCAGGAA GCGGTGACCAACATGCTTCGCCATGCAAAGGCGCGCAACCTGCTGGTGCGCCTGCAACGCCTGCCTGAAGGCCTGTCGCTGATGATCTGCGATGACGGCC AGGGGTTCTCGCCTGCCCCCGACCCGGGCCGGGAAGGCCAACGGGGCTTGGCCGGTATGTGCGAACGAACCCACCAGCTGGGGGGCACCTTTTCCATCAG CAGCCAGCCTGGCAACGGCACCCGTATCAACGCACTTTTCCCCTGGGCGCCCCGCGCTCTCGAACGGGCCAGCGCCCCTAAGGTTCTCGAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCTGCAATTTACTCCTGGTGGATGACCACGCACTGATTCGCGCCGGTGTGCGTGCGCTGATTCTGGATATTCCCGGCTACAGCGTCATCGGCGAAGCCAG CGATGGCGCACAACTGCTGGCGCAATACAGCGCCTTGCAGCCGGATATCGTGCTGCTCGATCTGTCGATGCGGCACACCGGTGGGCTGGATGCCTTGCAG CAACTCAAGCGCTTTTACCCCAATTGCAAGGTGCTGATTCTGTCGATGCACACCGAACCAGACCTGATCATGCGCGCACTGGAGTCCGGAGCCCACGGCT ACCTGCTCAAGGACACCACCGCCAACGAGCTGGAACATGCCCTGCTGGCCCTGCGTAACAACGAACGCTACCTGAGCCCCGCCATCGCCCACACGGTGAT CAACCAGGCGCTGATCCGCAGCCAGAGCCCCAGCGCTCCCGTTGCCCACAGCCATAACCTGACGGCGCGGCAACTGGAGATTTTGCGTCTGATCGTACGT
Amino Acid Sequence
>sensor histidine kinase
MYASFKSLIARSVSRSHVRRLTLALCLCSLLASLWAYLQDAPLPLLILLLNFATLVVVGLQQWNSRKAIKFEPQELADRLLQVQENERHRLSRELHDDIG QLLTAAKLQSEWLQRRLPPDLNTHCTVLCNTLNETLAKVRDVCAILNPRQLTSLGLEASLRAHLLKTLENTQVCWSLECQQRLTGIPEEMAVAAFRITQE AVTNMLRHAKARNLLVRLQRLPEGLSLMICDDGQGFSPAPDPGREGQRGLAGMCERTHQLGGTFSISSQPGNGTRINALFPWAPRALERASAPKVLE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site