Pseudomonas synxantha BG33R, PseBG33_3793

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas synxantha BG33R chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATATCTTCGCCAAGGAAATGCGCGTGGCCATGACGCTGACCGGCGTCACTTCCATCGCGCAAATCGACCGCACGACGCTGGTCCAGCCGTGATGAAGGCG GTGTCATTTATGTGAGGTTTATTTGAGACGTTGTTTGTTCGCGACAAACAACGCGAACCACCGTGACATTAAAGTTGAACGGGTCGGCTGCAACGCCGGC CCCTACCAGCCAAATAACTGGCGCCATTAATTAAAAGATAATTTTTATTTTAATTACAGTCTTTTGATTTATAAGAACTTTTTAAAACAAAACGGCTTTG GCACGAATCTCGCTGTAACACTTCCCACGCAGGTTAAGTGATGACAAGACGTGCGGCACGTGCCTCGGGGTTATAACTCAATGCAAAGCGGTTTAAACTG CTCCCCATGTTTTACGGAACTGAAGGAACAGTAAGACGCCTGGCACTTGCCGCCCTCATCCCGCCTGTAAGACAGCCAAGTGCTTAGAGGCCATCCGCTT
DNA Sequence for Gene
>PseBG33_3793
ATGAAAACACCCACCCAGACCAACGCGATTGACTTCGACACTGCCAAATTGCAGCGCCTGGGATTTGGTCAACCTTCCCTGCGTCCACGCCGCCCCGCAA CCCTGAGCGAACTTTGCCAGCAACTGAGCCAACAGTTGCAAACCAGCCTGGAGCCGGAGCGCATCCTCGGCCTGTTCTTTCGCGAAATACAACGCCTGGT GCCGCTGGACGCGTTGCAGTATCGCCATGCCGCCAGCGACCTGCGCCTCGAGTTCGGTCATCGTGGCCACCATTCGGTGAGCTACACCTTGAGCCACGAA GGCGAGCACCTTGGGGAACTGGTGTTTCGCCGCAACCAACGGTTGATCGACGAGGAATTGAGCCAGCTTGAATCCCTGCTGGTGACGTTGCTGTATCCAA TGCGTAACGCCCTGCTCTACCGTGCAGCCACCCGCAGCGCCCTGCGCGATTCGCTGACCGAAACCGGTAACCGCGTGGCCATGGATCAGACGCTACAACG GGAAATCGACATGGCCAGGCGGCATCTGCACCCCTTGTCGGTGCTGATGCTGGACATCGACCACTTCAAGAGAATCAATGACACCCATGGTCACGCCGCC GGCGATAGCGTGCTGCGCACCGTGGCGGGGGCGATCAAACACCAGTTGCGTAACGTCGACATGGTATTTCGGTTTGGCGGGGAAGAGTTTCTGATCCTGC TGTCCAACACCGGACGCGATGCAGCGAAGATGGTCGGTGAGCGTTTGCGTCAGGCGGCACAAGCCCAGGACTATTGGGTGGAAGGCACGCGGGTCGAATT GACGGTGAGCCTGGGTTGCTCGACGCTGCTGGCGGCCGAATCGGCTGAAAGCCTGCTGCGCCGAGCAGACAACGCGCTGTACGTGGCCAAGCGCGAAGGA CGCAACCGCTTGGCGATGGCGGGGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCCCCGCCATCACGTTTACATCACGCCTCGCTGGCAACGCGCACCGGGCGCTCGCGAATGGCTGGCGCCTTCTCTTTGTCTTTCTCTACGTTCTCCAGG CGCATGCAGCTTTCCAGGAACAGGTACATGTAGTCGTAGCTTTTGCATACTGCCTGGCGCAACTCTTCCTGCAGGGCCTTGCCAGGGTTGTTCCCGGCCA GGGTGCAGATGATTTCCAGGGCTTCCCACGGGTGGGCGTCGTCGTACTGGGCGTGCATCTTCAGCCACTTCATCGCCCGCTTGCGATCTTCCTCGGGGAA GGCGTCGGCATACACACCGGTAGAGCAGACCACGGCAGACCACTCCCCTGTCGCACCCTCGATCGCATAGTTGGTGGCGGCAATCGCGACGATCAACGAA TCCGCCGAGCTGGTGTGCCAGCACCAATGACTCAGTGCATGCAATTCCGGCGGCACGTCCTGGGCTTGCAGCTCTTCAAGGCTGACACCATGGGCACGCG
Amino Acid Sequence
>DeoR family transcriptional regulator
MKTPTQTNAIDFDTAKLQRLGFGQPSLRPRRPATLSELCQQLSQQLQTSLEPERILGLFFREIQRLVPLDALQYRHAASDLRLEFGHRGHHSVSYTLSHE GEHLGELVFRRNQRLIDEELSQLESLLVTLLYPMRNALLYRAATRSALRDSLTETGNRVAMDQTLQREIDMARRHLHPLSVLMLDIDHFKRINDTHGHAA GDSVLRTVAGAIKHQLRNVDMVFRFGGEEFLILLSNTGRDAAKMVGERLRQAAQAQDYWVEGTRVELTVSLGCSTLLAAESAESLLRRADNALYVAKREG RNRLAMAG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site