Strain | Pseudomonas synxantha BG33R chromosome, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TACGTGGGAAGCGGCGCTGCGCAGTAATCTGGACAGCGCGTTCTACAGTGCCCGCGCCTGCCTGCCGCTGTTGCAGGCAAGCGCCGGCAGTGTCGTGCTG ATCGGCTCCATCGCCTCGCTCGCGGCGGGGCCCGAGGTGTGCGGCTACACCACGGCCAAACATGCGTTGCTCGGGCTCAATCGCTCGCTGGCACGGGACT ACGGCCCCCACGGCGTGCGCGTGAACGCGGTGTGCCCGGGCTGGGTGCACACGCCGATGGCCGATGCCGAGATGCAGCCGTTGATGGAAGCGTACGGCGA CACCTTGCAGCAGGCGTACGAGCGCGTGTGTGCCGATGTGCCGCTGCGCCGCGCCGCCCGGGCCGAAGAGATCGCCAAGGTATGCCGCTTCCTGGCCAGC GACGACGCATCGATCATTACCGGGGCGACCTTGTTGGCGGACGGCGGGTCCAGCATCGTCGACGTGCCGACTCTGGCGTTTACGCGCCTGGAGCCTGCCC
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DNA Sequence for Gene |
>PseBG33_3582
ATGCCCAATGACCTGGATTTCAGCGGCCAAGTCGTGCTGGTCACCGGCGGCGCCCAAGGGATTGGCCTGGGCATCGTCCAGGCCTTTGCCCAACGCGGTG CGCGGGTGGTGATTGCTGATCGCCTGCTGGAACAAGCTGAAAGGGTGGCCGCTGGGTTGTGCGCGCAGGGCTACCAGGTCGAGGCCGTGGGCGTTGACCT GGCGCAAGCCGAGGCGGTATTCGCCTGCGTTCAAGGGTTGGCGCAACTGGATATTGTGGTGCACAACGCCGGGTATTTTCCGCTGACAGCCTTTGCCGAC ATCACCCCGGCGATCTTGCAACGCACCTTGGCGGTGAACCTCTCGGCGCTGTTCTGGCTGACCCAGGCGGCGTTACCGATGTTTCGTGAGCAAGGCCGGG GTTGCGTGCTGGTGACGTCTTCGGTCACCGGCAACCGGGTGGGTTATCCGGGGCTGAGCCACTATGCGGCGTCAAAGGCTGGGGTGAATGGGTTTATCCG CAACGCGGCGTTGGAACTGGCGCCGTTGAATGTGCGGGTCAATGGCGTGGAACCGGGCATGATCGCCACGCCGGCGATGAGCAACCTGGGCGATGCCGCG CTGAATGAGAGCATCGCCAGCCGTGTGCCACTGGGGCGTTTGGGCGCGGCTGCGGATATTGCCGGCGCGATGCTGTTTCTGGCTTCTGACCTGGCTGGCT ATATCACCGGGCAGACCTTGGTGGTCGATGGTGGCTCCACCCTGCCCGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGGGGACCCATGTGGGAGGGGGCTTGCTCCCGATAGCGATGGTTCAGTCAAATATCCAATGGCTGACACACTGCTATCGGGAGCAAGTCGAATCGTCGCA CCGCCCCTCCCACATTGGATTTCCTGCAGCCTGAAGGATCTGTTTATGCCCCCACCGCCTGCAACCGGCTGGAGCGAAAATCCTTGGGCGACACCTCGAA CTGCTTCTTGAACGAACGGCTGAAGTGCGCCGAGTCGGTAAAGCCCCACTTGTAGGCAATCGAGGTGATCGACTCGCTACGCAGGAAGGGGTTGGTCAAG TCGTCCGCACTGCGCTTGAGCCGTGCGCGCTGGATGTAGCGGCAGACGCTGTCGTCCTGCTCCTCGAACAAACGGTACAGGTGCCGCACCGAGATATTCA GGCGGTTGGCCAGGCCAATCGGGCTCAGGCCAGGCTGGCCCAACGACTCATCAATGACCTTTTGCACATAGCTGCGCAGATTATTGCCCTGCAACGCAGC
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Amino Acid Sequence |
>3-ketoacyl-ACP reductase
MPNDLDFSGQVVLVTGGAQGIGLGIVQAFAQRGARVVIADRLLEQAERVAAGLCAQGYQVEAVGVDLAQAEAVFACVQGLAQLDIVVHNAGYFPLTAFAD ITPAILQRTLAVNLSALFWLTQAALPMFREQGRGCVLVTSSVTGNRVGYPGLSHYAASKAGVNGFIRNAALELAPLNVRVNGVEPGMIATPAMSNLGDAA LNESIASRVPLGRLGAAADIAGAMLFLASDLAGYITGQTLVVDGGSTLPE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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