Pseudomonas synxantha BG33R, PseBG33_3089 (cobM)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas synxantha BG33R chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTGTTCCGCCGTAACCGCGACGAACACTACTCGGCATGACCCTCGTCGTCGGCCTGGGTTGCCAGCGGGGTTGTGATGTCCGAACCCTGCTGGAACTCC TTGATAGCGCCCTCGCCGAAGGCGGCATTGAACGCCAACGCATTACCGCGCTGGCGAGCATTGATCGCAAACAGGCTGAGCCGGGGTTGGTGGCCCTGGC CCAATTGTTGAGCCTGCCCTTGCAGTGTTTCAGCGCCGAACAACTGGCCGGCTTTGAACATCGGCTGAGCCACAAATCAGCCGTAGCATTTAGCCATACC GGCTGTTACGGCGTCGCCGAAAGCGCCGCATTGGCCCTGGCTGAGCAACTCGCCCACGGCCCCGCCCGCCTGCTCATCACCCGCAAGAAAACCATCCAGG CCACCATTGCATTGGCCTGCGCCGGTTAAAATCCCGATAATTGCCGCTCTCGATCATGAGCATTCTTCATGCTCGCCCGTTTTTTCAACAGGAATTCCCC
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| DNA Sequence for Gene |
>PseBG33_3089
|cobM
ATGACCGTCTACTTCATCGGCGCAGGCCCCGGCGACCCGGAACTGATTACCGTCAAGGGCCAGCGGCTGATCCGCAGCTGCCCGGTGATCATCTACGCTG GCTCGCTGGTGCCTGCGGCGGTACTGGAAGGTCATCAGGCACACCAGGTGGTCAACAGTGCCGAGCTGCATCTGGAACAGATCATCGACGTGATCAAAGC CGCCCATGCGCAAGGCCAGGATGTGGCGCGCGTGCACTCCGGCGACCCGAGCCTGTATGGGGCGATTGGTGAGCAGATCCGTCACTTGCGCGAGTTGGGC ATTCCCTTCCAGATCATTCCCGGGGTTACGGCGGTGGCTGCCTGCGCGGCGTTGCTGGAAACCGAACTGACCCTCCCGGACATTGCCCAGAGCGTGATCC TGACCCGCTATGCAGATAAAACCAGCATGCCGGCGGGTGAGGACTTCGACAGCCTGGCCCGGCACGGCACGACAATGGCCATTCACTTGGGGGTCAATCA TCTGGAAAGGATCGTCGCTGAGCTGCTGCCGCACTATGGTGCAGATTGCCCGATCGCCGTGGTGCACCGCGCGACATGGCCGGACCAGGATTGGGTGGTG GGTTCGTTGAGTGATATTGCCCAGAAGGTCGCGACTAAAGGCTTTCGGCGTACGGCGCTGATTGTGGTCGGGCGGGTGTTGGCAAATGATAGCTTTGGCG AATCCTCGCTGTACCGCGCAGGTCACGCCCACCTCTATCGCCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGAAATGGATTAATCCACAGCCAATCCAAACTATCAGACAATCATCATAACTTGCTGAATTTAGAGCATAAAAAACGGCGCTCACGGGGCGCCGTTTTTT AATCTCGCAGTGAACGCCTTACTTAGTAGTAGGCGTTTTCTTTCTGCGTGTGGTCGGTCACGTCACGTACGCCCTTGAGCTCGGGAATACGCTCAAGCAA GGTGCGCTCGATGCCCTCGCGCAGGGTCACGTCCGCCTGGCCGCAGCCTTGGCAGCCACCGCCGAACTTCAATACGGCAATACCGTCATCCACCACGTCG ATCAGGCTCACCTGGCCGCCGTGACTGGCCAGCCCCGGGTTGATCTCGGTTTGCAGGTAGTAGTTGATGCGCTCGTTGACCGGGCTGTCGGCGTTGACGT TCGGCACCTTGGCGTTGGGCGCCTTGATGGTCAACTGGCCGCCCATGCGATCGGTGGCGTAGTCGACTACGGCGTCGTCAAGGAAAGCTTCGCTGAAGGC
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| Amino Acid Sequence |
>precorrin-4 C11-methyltransferase
MTVYFIGAGPGDPELITVKGQRLIRSCPVIIYAGSLVPAAVLEGHQAHQVVNSAELHLEQIIDVIKAAHAQGQDVARVHSGDPSLYGAIGEQIRHLRELG IPFQIIPGVTAVAACAALLETELTLPDIAQSVILTRYADKTSMPAGEDFDSLARHGTTMAIHLGVNHLERIVAELLPHYGADCPIAVVHRATWPDQDWVV GSLSDIAQKVATKGFRRTALIVVGRVLANDSFGESSLYRAGHAHLYRP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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