Pseudomonas synxantha BG33R, PseBG33_2794
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas synxantha BG33R chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGGTGTCTGGACCTTTATCGGTGCCTTGGGCGCCAGTGTCGGGATTTCCCCGCAACACAGTGGTGAGGTACTCGCCATCGCAACCGTAATGGGCATTG CCGGCGCCGCGAGCGCGTCGCTGATTGGCGGGCGACTGCCCCGAGCAATGCTGTTGCTCGGGGGTTATGCGCTGATGGTGGCGGCTGTGCTGCTTTTGCT CGGCGAGCCAGCGCTGCTGCGTTTTGCCCTGGCGGCGCTGCTGTTCAAGTTCATCTGGACGTTCATCCTGCCGTTGGTGCTGGCCTGCCTGGCCGATCTT GATCACAGCGGCAAACTCATGAACGCCTCCAACCTGGTGATCGGCGGTGGCCTGGCCATCGGCCCGGCGATTGCCGGCCGCCTGATCGAGGCCAGCGGCG GGTTCACCCTTCTGCTGCTGGGCGCTGCCGTTATCACGTTGCTTTCCCTGGTGATGATCCTCACCAGCCGTCCCAACCACCTCACCGAACTGGAGCCGGT
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| DNA Sequence for Gene |
>PseBG33_2794
ATGAACCGAACCACCGCATTTTTCTTCGATGAAATGAGCCTGTGGCACAGCGCAGGTGCGCACGCGCTGACATTACCCGTAGGCGGCTGGGTACAACCGC CGGCTGGCAGCGGTCATGCCGAATCCCCGGAGACCAAACGCCGCTTGAAAAGCTTGTTGGATGTGTCTGGATTGACGCGTCATCTGCACCTGCTTAGCGC ACCGCCGGCCAGTGAAGCAGACCTGCTACGGGTGCACAGCAGCGCTTATCTGCAACGCTTCAAGGCCCTGAGCGATGCTGGCGGCGGCGAGCTCGGCCCG CAGGCGCCGATTGGGCCGGGCAGCTACGAGATCGCGAAACTGTCTGCGGGCTTGACCATCGCCGCCGTAGACACGGTGCTCAAGGGCCAGGCGCACAATG CCTATTCCCTGTCCCGGCCACCTGGGCATCACTGCCTGGCAGACAGCGCCATGGGCTTCTGCTTTCTCGCCAATATTGCCATTGCCATCGAAGCGGCCAA GGTCCATAACGGGCTCGGCAAAGTCGCCGTGATCGACTGGGACGTGCACCACGGTAACGGCACGCAATCAATCTTCGAGGAGCGCGCCGATGTGTTGACG GTTTCACTGCATCAGGACGCTTGCTACCCACCGGGCTACAGCGGCGAACAGGATCGTGGCCGGGGTCCTGGCCTGGGCGCCAACATCAATATCCCGCTGC CGCCGGGCAGTGGTCACGCAACCTATGCGCATGCGATGGAACGCATCGTGTTGCCCGCCCTTGAGCGTTTCGAGCCAGAGCTGATCATCGTCGCCTGCGG CTATGACGCCAATGCCGTCGACCCACTGGCGCGCATGTTGCTGCACAGCGAATCGTTCCGGCTGATGACCCGCAGCCTGCGCCAGGCAGCCGAGCGTATG TGCCAGGGCCGCCTGGTGCTGGTGCATGAAGGCGGTTACAGCGAAGCCTACGTACCGTTTTGCGGGTTGGCGACTCTGGAGGAATTAAGCGGCGTGCGCA CCGCGGTGCAAGACCCAATGCTGGAGTTTGTGCAATTGCAGCAACCCGGTGCGGCGCTGCAAGCGTTTCAGCAACAGTGGGTGGAGCGGTTGGCGCAGGG GGTCAGTGATTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGCAAGGCGCCACACCCGCGCAATATCCGCGGCGCGCTCGCGCAACAGGCGAGGGGCCTCGCTGCAGGCTTGCTCCAGACTCATTGGTCCCGACGGTAG GGCAAACGCCGCATCCACACCGTGGGCATACATCTGCTCGTAACCGTCGCCCAAGGTGCCTGCGATCACAATGACCGGTACGCCGTGCTGGCTGGCGATG CGCGCAACCCCGAACGGGGTCTTGCCGCGCAGGGTCTGAGCGTCGAAGCGGCCTTCGCCGGTGATGACCAGGTCGGCGCCGCGTACGGCGTGTTCGAGGC CAACCAGTTCGGCGACCACCTCCACGCCCGGACGAAATTGTGCACCGAGGAATGCCTTGGCGGCGAAGCCCAGGCCACCGGCAGCACCACTGCCCGGTTC GTCGCGCACATCCTTGGGCAGCACCTGGGCGCAGTGGTGGGCGAAATGGTCAAGGGCGGCGTCCAGTTGGGCCACCTGCTCGGGACTCGCACCTTTCTGC
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| Amino Acid Sequence |
>acetoin utilization protein
MNRTTAFFFDEMSLWHSAGAHALTLPVGGWVQPPAGSGHAESPETKRRLKSLLDVSGLTRHLHLLSAPPASEADLLRVHSSAYLQRFKALSDAGGGELGP QAPIGPGSYEIAKLSAGLTIAAVDTVLKGQAHNAYSLSRPPGHHCLADSAMGFCFLANIAIAIEAAKVHNGLGKVAVIDWDVHHGNGTQSIFEERADVLT VSLHQDACYPPGYSGEQDRGRGPGLGANINIPLPPGSGHATYAHAMERIVLPALERFEPELIIVACGYDANAVDPLARMLLHSESFRLMTRSLRQAAERM CQGRLVLVHEGGYSEAYVPFCGLATLEELSGVRTAVQDPMLEFVQLQQPGAALQAFQQQWVERLAQGVSD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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