Pseudomonas synxantha BG33R, PseBG33_1835
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas synxantha BG33R chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGAAAACCTGCTGCGCCTGGCCGCCGGGGCGATCTCGCGCTTGCAGAGCCACCAACTGTCGAGCCTGGAACAGACCGGCACCACCGCCGATGGCCGCC TGCAAACCACGTGGCAGTTGGAAATCCCCATGCGCACCCTGCAAGACATCGTGCCGTTGCAGGTCAAGTTTCAGCGCGAGGAGCCTGCGCCTGACAAGGA TCAGCCCGAGCGCAAGGATAAAAAAGATCCGAAGCAGATGCTCTGGCGCGTCGAACTGGCCTTCGACATGGAGCCGCTGGGGCCGCTGCAAGTTCAGGCG CAGTTGTCCCAGGGCAAACTGTCCAGTCAGTTGTGGGCCAGTCGCCCTTTCACCGCCAGCCTGATCGAAAGTCACCTGGGCAGCCTGCGCGAGCGCCTGG TGTCATCCGGACTCAACGTCGGCGACCTGGATTGCCACCTGGGCACCCCGCCACGCGGTGCAAAAACCGGATTGGAACAACGCTGGGTGGATGAAACCGC
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| DNA Sequence for Gene |
>PseBG33_1835
ATGAAGAACGCCGCCCCACTCCGCCAGGCCATCGCCCTCAAGTACGACGGCCAACAAGCCCCCACCCTGACCGCCAAGGGCGATGACGCCCTGGCCGAAG CGATTCTCAAGCTGGCACGGGAAAACGAAGTACCCATCTATGAAAACGCCGAGTTGGTGAAGCTGCTGGCGCGTATGGAACTGGGGGACAGCATTCCAGA AGAGCTCTATCGCACGATTGCCGAGATCATTGCGTTTGCATGGACGTTGAAGGGCAAGTTCCCGGTGGGCTACGACCCGGATGCGGGGCCGATGGAGCGG GATGTCACTGAGCGTGGCGACGATTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTAGCCACAGGCATACCAAGATCCACTGTGGGAGGGGGCTTGCTCCCACATTTTTTGATCTGTGTTCAGTTCAGAACTTCACTCAGAGGAATGAAATTGA CCCGGTCGCCAATGGCCAATGTGGTCCCCTCCATCACCTCCACAAACCCTTCCGCCCACGCTGCGCTACGCAGCACCCCGGAGCTCTGGTTGCGATAGAT AATCGCCTTGCCCTGCTCGATACGCCCGCGCAGGTATTCGCGGCGGTTGCCAGGCTTGGGCCAGTCGAATCCTGCCGGCACCTCGAAACGCAGCGGCTGC ACCTGCGCCACGCCTTGGCGGCGCAGCAGGTACGGGCGCGCCAATAGCGCAAAGGTCACCAGGGTCGAGGCCGGGTTACCTGGCAGGCCGATCACCGGCA CGCCACGAAAATGCCCGAAGGTCAGCGGTTTGCCTGGCTTGATCGCCAGCTTCCACAACGCCAACTCGCCCTCTTCACGCAAGGCAATGCCGAGGAAGTC
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| Amino Acid Sequence |
>FlhB
MKNAAPLRQAIALKYDGQQAPTLTAKGDDALAEAILKLARENEVPIYENAELVKLLARMELGDSIPEELYRTIAEIIAFAWTLKGKFPVGYDPDAGPMER DVTERGDDY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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