Pseudomonas synxantha BG33R, PseBG33_1733 (gyrA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas synxantha BG33R chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACCGAGAAAGGCGTGGTCGAGCGGCCGGATACTGCCAAATTGGCCAGGTTGATGTGCCGTAAGCGGCTGCATTGAGGACAGTGGTGTCTGTGAAATAGC AATCGGGGGCAAGCCCCCTCCCACATTTTGACTGTGTTCACAATTCAAGTGTGGGAGGGGGCTTGCCCCCGATTGGGCCCGAAAGTCAATAAAACCCTCG GATCCATCCTCAAAAAACAGCATCACCCCACCTCTGAGCCCCTCTCGTCCCCTTCAAGCCTGTCATCCGTCAAATTACTAGCCTCCATGCGCATCAGGGG GATAGGTGCGTGGCGGCGATTGTGATAACATTCGGCGGTTTCCAGGGCTGCCCCGAGGGGTTGCCCATAACGCGCAGATCCGTGTCATAACTCGTTGATT TGTCGTAAGTCGTTGTCAGGCACTGTGTCGGCAGCGGCGAGCTTCGTTCGTCCCGAATGGATGTGACGAGGTTTCACCCGAAAAAGGAATCAGGCTTCTC
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| DNA Sequence for Gene |
>PseBG33_1733
|gyrA
ATGGGCGAACTGGCCAAAGAAATCCTCCCGGTCAATATCGAAGACGAGCTGAAACAGTCCTACCTCGACTACGCGATGAGCGTAATTGTCGGTCGGGCAC TGCCTGATGCGCGCGATGGCTTGAAGCCCGTGCACCGGCGTGTGCTGTTCGCGATGAGCGAGCTGGGTAACGACTGGAACAAGCCGTACAAGAAATCTGC CCGTGTTGTCGGTGACGTGATCGGTAAGTATCACCCTCACGGCGACACTGCGGTGTACGACACCATCGTTCGGATGGCCCAGCCGTTTTCCCTGCGCTAC CTGCTGGTAGACGGCCAGGGCAACTTCGGTTCGGTCGACGGCGACAACGCCGCGGCCATGCGATACACCGAAGTGCGCATGACCAAGCTGGCGCATGAGC TGCTGGCCGACCTGCATAAAGAAACCGTGGACTGGGTGCCGAACTACGACGGCACCGAAATGATCCCGGCCGTCATGCCCACCAAGATCCCCAACCTGCT GGTCAACGGCTCCAGCGGTATCGCCGTGGGCATGGCCACCAACATCCCGCCGCACAACCTCGGTGAAGTCATCGATGGTTGCCTGGCCCTTATCGACAAC CCCGAGCTGACTGTCGATGAGCTGATGCAGTACATCCCCGGCCCGGACTTCCCGACCGCCGCGATCATCAACGGTCGCGCCGGCATCATCGAAGCCTACC GCACCGGTCGCGGGCGCATTTACATGCGCGCCCGTTCGATGATCGAAGACATCGACAAGGTCGGTGGCCGCCAGCAGATCGTCATCACCGAGCTCCCATA CCAACTGAACAAGGCGCGTCTGATCGAGAAGATCGCCGAGCTGGTTAAAGAGAAGAAGCTCGAAGGCATCACCGAACTGCGCGACGAGTCCGACAAAGAC GGTATGCGCGTGGTGATCGAGCTGCGTCGTGGCGAAGTGCCTGAGGTGATCCTCAACAACCTCTACGCCCAGACCCAGCTGCAAAGCGTGTTTGGTATCA ACGTGGTTGCACTGATCGACGGCCGCCCACGTATCCTGAACCTCAAGGACCTGCTGGAAGCCTTCGTGCGTCACCGTCGCGAAGTGGTCACCCGCCGTAC CGTGTTCGAACTGCGCAAGGCCCGCGAGCGTGGGCACATCCTGGAAGGCCAGGCCGTTGCGCTGTCGAACATCGATCCGGTCATCGCCTTGATCAAAGCC TCGCCAACCCCGTCGGAAGCCAAGGAAGCGTTGATCAGCACGCCTTGGGAATCCAGCGCTGTGGTGGCCATGGTTGAGCGCGCAGGCGCCGATTCGTGCC GTCCGGAAACCCTGGACCCGCAATACGGCCTGCGCGAAGGCAAGTACTTCCTGTCGCCGGAGCAGGCCCAGGCCATCCTGGAACTGCGCCTGCACCGCCT GACCGGCCTTGAGCACGAGAAGCTGCTGGCCGAGTACCAGGAAATCCTCAACCAGATCGGCGAGTTGATCCGCATCCTCAGCAGCGCTGTGCGCCTGATG GAAGTGATCCGCGAAGAACTGGAAGTGATTCGCGCCGAATATGGCGACGTGCGCCGCACCGAAATCCTCGATGCGCGCCTGGACCTGACCCTGGGTGACA TGATCCCGGAAGAAGAGCGCGTCGTGACCATCTCCCACGGTGGCTATGCCAAGACCCAGCCGTTGGCTGCGTACCAGGCTCAGCGCCGTGGCGGTAAAGG CAAATCGGCTACCGGCGTCAAGGATGAGGACTACATCGCTCACCTGCTGGTCGCCAACAGCCACACCACGCTGCTGCTGTTCTCCAGCAAGGGCAAGGTG TACTGGCTCAAAACCTACGAAATCCCGGAAGCTTCCCGTGCTGCCCGTGGTCGCCCATTGGTCAACCTGCTGCCGCTGGACAGTGATGAATACATCACCA CCATGCTGCCGGTCGAGGAATACACCGAAGGTCACTTCATCTTCATGGCCACCGCCAAGGGCACCGTGAAGAAGACCCCGCTGGAATCCTTCAGCCGTCA ACGCAGCGTGGGCCTGATCGCCCTGGAGCTGGATGAAGGTGACGTACTGATTTCCGCCGCCATTACCGATGGCGAGCGCGAAGTCATGCTGTTCTCCGAT GGCGGCAAGGTTACGCGCTTCAAGGAATCCGACGTGCGCGCCATGGGCCGTACCGCCCGCGGTGTACGCGGCATGCGCCTGCCGGAAGGGCAGAAGCTGA TTTCGATGCTGATCCCGGAAGAAGGCAGCCAGATCCTCACCGCTTCCGAGCGCGGCTACGGCAAGCGCACTGCCATCAGCGAGTTCCCGGAGTACAAGCG TGGCGGCCAGGGCGTGATCGCCATGGTCAGCAACGACCGCAACGGCCGTCTGGTCGGCGCGGTGCAGGTGCTTGATGGCGAGGAGATCATGCTGATTTCC GACCAGGGCACCCTGGTGCGTACCCGTGTGGCTGAAGTGTCGAGCCTGGGTCGTAACACCCAGGGCGTGACCCTGATCAAGCTGGCCAAGGATGAAAAAC TGGTCGGCCTGGAGCGTGTGCAGGAGCCTTCGGAAGTTGAAGGTGAAGAGCTGGAAGGCGAGGAGTTCGACGGCGAGGTGATCGCAGCCGGCGATGACAA CGTCGACGAGCCAACCCTCGATGCTGCCGCAGACGAAGAAGAACCGCAGGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGACACACAGGGGGCGGATGAAGATTCGCCCCCTTGTTGTTTGTCCCCTTTGAAAAATACACGTCCTTTGCCTGGACGCGGTCCATGTGGGAGCTGGC TTGCCTGCGATAGCATCACCGCGGTATCACTGGAACTACCGAGGTGCCTGTATCGCAGGCAAGCCAGCTCCCACATGGGTTGGCTTCAGAAAAAGGGTGT TGCCGAACATGATTGCAGCCCCACCAGATCAGAGTGAGATTGGATGTGAGCAAGAGAGCCTATAACTTCTGTGCCGGTCCCGCGGCGCTTCCTGAAGCAG TCCTGCAGCGTGCGCAGGGTGAACTCCTCGACTGGCATGGAAAAGGCCTCTCCGTGATGGAAATGAGCCATCGCAGCGATGAGTTCGTGTCCATCGCCAC CAAGGCCGAGCAGGATCTGCGCGACTTGCTGGACATCCCATCCAATTACAAAGTGCTGTTCCTGCAAGGCGGCGCGAGCCAGCAGTTCGCTCAGATCCCA
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| Amino Acid Sequence |
>DNA gyrase subunit A
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWNKPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRY LLVDGQGNFGSVDGDNAAAMRYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTKIPNLLVNGSSGIAVGMATNIPPHNLGEVIDGCLALIDN PELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRIYMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRREVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKA SPTPSEAKEALISTPWESSAVVAMVERAGADSCRPETLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQEILNQIGELIRILSSAVRLM EVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV YWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVEEYTEGHFIFMATAKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSD GGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNDRNGRLVGAVQVLDGEEIMLIS DQGTLVRTRVAEVSSLGRNTQGVTLIKLAKDEKLVGLERVQEPSEVEGEELEGEEFDGEVIAAGDDNVDEPTLDAAADEEEPQE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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