Pseudomonas synxantha BG33R, PseBG33_1732 (mtnA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas synxantha BG33R chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGAGAAGCAGGTGATGCCGCCCTTGAGCTGTTCGGCGATGGCCAGGTTGGTGCCGTCGCGCACAAAGGCTTCATCGACCCATTTGGCTTCGGCCGGCCA GATGTGTTTTTCCAGCCAGGTCATCAACGGCAGGTCATCGGCCAAGCCACGGAACAGGCTCATTGCCGCATGGCCGTGGGCGTTGATCAAGCCGGGGCTG AGCAACATGCCGGGCAGTTCGCGCACCTCATTGGCCGCCAGCTTCAATGCGGCGGCCCGTGGGCCGATAAAGGCAATGCGCCCATCGCGGATGCCCAGAC CATGCTCTTTGAGCACCACGCCGGCAGGTTCGACCGGTACCAGCCAGGTCGGCAAGAGCAACACGTCGAGCGGGGCGGCAGTGGAGGTCATCGCAGGCTT CTTCCCAGGCAGCTATAAAAGAAGGGCGAAGTATACCCGAGCGTCCTGGCTGGCGGATCGCTATAATCCGCGGCTTTTGTTCATGAGTGCGGGGTAAGGG
|
|
| DNA Sequence for Gene |
>PseBG33_1732
|mtnA
ATGCGCGACCGACTGTTGGCTGCAGAGAAAGTGAAGGCCATCGATTGGCGTGACGGCGCGCTGTACCTGCTCGATCAGCGCGTGTTGCCGTCCCGGGAGA GCTGGGTGGCCTGTCATACCGTCGCGGCGGTGGCCGAGGCCATTCGTTCGATGGTGGTGCGGGGCGCAGCGGCCATCGGCATCAGCGCCGCCTATGGCCT GGTGCTGGCCGCCCGTGAGCGCATTGCCGAGGGTGGCGACTGGCAGGCAGCGTGGGAAGAAGACTACGCGCTGCTGGCCGATAGCCGCCCGACCGGGTCG AATCTGTTCTGGGCACTCAAGAATATGCGCGACTGCCTGGACCGCCTCAAGCAGCACGCCGACCCGGTTGCCGTGCTGGAAGCCCAGGCCATTGTGATCC ATGAAAGCGACCGGGAGGCCAATGTGGTCATGGCCCAGTTGGGTATGGAGCGGATTCGCAAGCACCAGGGCAACGCCCAGGCGATCCTCACCCATGGCAA CGCCGGAGCATTGGCCACGGGCGGTGTCGGTACGGCCCACGGCGTGATTCGCGCGGCGTTCCTGGAGGGGCTGGTCGAACAGGTCTATGTCAACGAAACC CGTCCATGGCTGCAAGGCTCGCGCCTGACGGCGTGGGAGTTGGCGGGCGAGGGCATCCCGGTGACGGTGAATGCCGACTCCGCCGGGGCGCATATCCTCA AGACCAAAGGCGTGACCTGGGTGGTGGTCGGTGCTGACTGTATTGCCGCCAATGGTGACGTGATCAGCAAGATCGGCACTTATCAGCTAGCCGTCTGTGC CATGCATCATGGCGTGCGCTTTATGGTGGTGGCGTCGAGTTCGACGCTCGATTTGATGATGGCTACCGGCGATGATGTTGCGCTGGAGACGCGCGATCCC GCTGAGCTGCTGGACGTCATGGGGCAGCGGCTGGAGGTGGATGCGTTTAATCCGGTATTTGATGTGACCCCGGCCGACCTGATTGATGTGATCGTGACCG AGAAAGGCGTGGTCGAGCGGCCGGATACTGCCAAATTGGCCAGGTTGATGTGCCGTAAGCGGCTGCATTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGACAGTGGTGTCTGTGAAATAGCAATCGGGGGCAAGCCCCCTCCCACATTTTGACTGTGTTCACAATTCAAGTGTGGGAGGGGGCTTGCCCCCGATTGG GCCCGAAAGTCAATAAAACCCTCGGATCCATCCTCAAAAAACAGCATCACCCCACCTCTGAGCCCCTCTCGTCCCCTTCAAGCCTGTCATCCGTCAAATT ACTAGCCTCCATGCGCATCAGGGGGATAGGTGCGTGGCGGCGATTGTGATAACATTCGGCGGTTTCCAGGGCTGCCCCGAGGGGTTGCCCATAACGCGCA GATCCGTGTCATAACTCGTTGATTTGTCGTAAGTCGTTGTCAGGCACTGTGTCGGCAGCGGCGAGCTTCGTTCGTCCCGAATGGATGTGACGAGGTTTCA CCCGAAAAAGGAATCAGGCTTCTCATGGGCGAACTGGCCAAAGAAATCCTCCCGGTCAATATCGAAGACGAGCTGAAACAGTCCTACCTCGACTACGCGA
|
|
| Amino Acid Sequence |
>methylthioribose-1-phosphate isomerase
MRDRLLAAEKVKAIDWRDGALYLLDQRVLPSRESWVACHTVAAVAEAIRSMVVRGAAAIGISAAYGLVLAARERIAEGGDWQAAWEEDYALLADSRPTGS NLFWALKNMRDCLDRLKQHADPVAVLEAQAIVIHESDREANVVMAQLGMERIRKHQGNAQAILTHGNAGALATGGVGTAHGVIRAAFLEGLVEQVYVNET RPWLQGSRLTAWELAGEGIPVTVNADSAGAHILKTKGVTWVVVGADCIAANGDVISKIGTYQLAVCAMHHGVRFMVVASSSTLDLMMATGDDVALETRDP AELLDVMGQRLEVDAFNPVFDVTPADLIDVIVTEKGVVERPDTAKLARLMCRKRLH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|