Pseudomonas synxantha BG33R, PseBG33_1497 (pcaB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas synxantha BG33R chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CACTGTCGGTATGCACGCCAAGACGTCCAGCTACATCATGACCGGCGCGCTGTTTCTGTACATGTGCATGCAGCCGCTGTTCGGCATGTTGGCCGACAAG ATCGGGCGACGTAATTCCATGCTCTGGTTCGCCGGCCTTGGCACCTTGTTCACTGTGCCGATCCTGTTGACCTTGAAAACCGTGACCAGCCCGTTCCTGG CGTTTGTACTGATCACCCTGGCCTTGGCGATTGTCAGCTTCTACACCTCCATCAGCGGCCTGGTCAAAGCCGAGATGTTCCCGCCCCAGGTGCGTGCCTT GGGTGTGGGCCTGGCATATGCCGTGGCTAACGCGGTGTTTGGCGGTTCGGCGGAAGTGGTCGCACTGAGCCTGAAATCCATCGGCATGGAAAACACCTTC TATTGGTACGTCACTGCGATGATGGCGGTGGCCTTCCTGTTCAGCTTGCGCCTGCCTAAACAGGCGGCGTACCTGCATCACGATTTGTAAGGGATGAGTT
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| DNA Sequence for Gene |
>PseBG33_1497
|pcaB
ATGACGCTGCGCACGAGCAATCAACTGTTCGACGCTTACTTCACCGCCGCCAGCATGGCCGAAGTGTTCTGTGACCAGGGACGCTTGCAGGGCATGCTGG ATTTCGAGGCGGCGCTGGCCCGGGCCCAGGCTCGGGTCGGGCTGATTCCCCAGGCTGCCGTCGCGCCGATTGCCCAGGCGTGCCTGGCTTCGCTGTATGA CGTCGATGCGCTTGGCGCGGCCATTGCCACGGCGGGTAATTCGGCGATTCCAGTGGTAAAGGCGCTGGGCAAGTTGATCGCCAGTGAAGAGGCCGACGCC GAGCGTTATGTGCACCTGGGCGCGACCAGCCAGGATGTGATGGACACCGGCCTGGTGCTGCAAGTGCGCCAGGCGCTGGTGTTGATCGAGGCGGATTTGG CGCGCCTGGGGGACGTGCTGGCTGCCCAGGCGCAGCGTTACGCCGCTGTGCCCCTGGCCGGACGCACCTGGCTGCAGCACGCGACGCCGGTCACCCTGGG CATGAAAATCGCCGGTTGGCTGGGTGCGGTGACACGCAGTCGCCAGCGCCTTGCCGAATTGAAACCGCGCCTGTTGGTGCTGCAATTTGGCGGTGCGTCC GGCACCTTGGCGGCGCTCGGCGAACACGCCATGCCTGTTGCCGAAGCCTTGGCCGCCGAGTTGCAACTGGGCTTGCCGGAACAGCCCTGGCACACCCAGC GCGATCGCCTGGTGGAATTTGCCAGCGTACTCGGTCTGATCGCCGGCAGCCTCGGCAAACTGGGACGCGACATCAGCCTGTTGATGCAAACCGAGGCGGC AGAAGTGTTTGAGCCCGCCGCGCCGGGCAAGGGCGGTTCATCGACCATGCCGCACAAACGCAACCCCGTAGGCGCCGCCGTATTGATCAGCGCTGCCACC CGCGTGCCGGGCCTGGTGGCGACCATGTTCAGCGCCATGCCCCAGGAGCACGAACGCAGCCTGGGCCTGTGGCACGCCGAATGGGAAACCTTGCCAGAGA TTTGCCGCCAGGTGTCCGGCGCCTTGCAACAGGCGCTGCTGGTGAGTGAAGGGCTGGAGGTCGATACCGCGCGCATGGCGCAGAATCTGGACCTGACCCA GGGCCTGGTGTTGGCTGAAGCAGTCAGCATCGTGCTTGCCCAACGCCTGGGCCGCGATACCGCACACCACCTGCTGGAGCAATGCTGCAAACGCGCCGTG GCCAAGCAGCGTCACTTGCGCGCCGTGCTGGCGGATGAGCCCCAGGTGACTGCCGAGTTGTCAGCGGCTGAACTGGACCGCCTGCTCGACCCGGCCCATT ACCTGGGCCAAGCCCAGACCTGGGTCACGCGTGCCGTGACTGAACACTTTGCGTTGACTGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAGACTGCTGTGGCTTTTGTACAACTCGCCGAGGGCGAATTGCATTACCAATTGGACGGGCCGGTGGATGCACCGGTGCTGGTACTGTCCAACTCTCTG GGCACCGACCTGCACATGTGGGACGTGCAGATCCCGGCGTTCACCGAGCATTTTCGCGTGTTGCGTTTCGATACCCGCGGTCACGGCAAGTCCCTGGTGA CCGAGGGGCCCTACAGCATCGAACAACTGGGGCGCGACGTGCTTGCGTTGCTGAATGCGCTGGATATCCAGCGTGCGCACTTTTGCGGCCTGTCCATGGG CGGCTTGATCGGCCAATGGCTGGGCATCCACGCCGGCGAGCGTTTGCAGCGCCTGGTGGTGTGCAATACCGCCGCCAAGATCGGCACGCCTGAGGTCTGG AACCCCCGCATCGAAATGGTCCTGCGTGACGGCGCCGCTGCGATGGTGGCGCTGCGCGATGCTTCGATTGCGCGCTGGTTTACCGCGGATTTCGCTGCGG
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| Amino Acid Sequence |
>3-carboxy-cis,cis-muconate cycloisomerase
MTLRTSNQLFDAYFTAASMAEVFCDQGRLQGMLDFEAALARAQARVGLIPQAAVAPIAQACLASLYDVDALGAAIATAGNSAIPVVKALGKLIASEEADA ERYVHLGATSQDVMDTGLVLQVRQALVLIEADLARLGDVLAAQAQRYAAVPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLAELKPRLLVLQFGGAS GTLAALGEHAMPVAEALAAELQLGLPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPAAPGKGGSSTMPHKRNPVGAAVLISAAT RVPGLVATMFSAMPQEHERSLGLWHAEWETLPEICRQVSGALQQALLVSEGLEVDTARMAQNLDLTQGLVLAEAVSIVLAQRLGRDTAHHLLEQCCKRAV AKQRHLRAVLADEPQVTAELSAAELDRLLDPAHYLGQAQTWVTRAVTEHFALTA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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