Pseudomonas synxantha BG33R, PseBG33_0929 (mqo_1)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas synxantha BG33R chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCCATTGCGCTCGGCCACTTGTGTTGTTTGCCCGTTTTGCCGCATGTCGGCAGAGGTTTACGGGCCAGGTGCCAGGCTGGGGCAGCCCTTTTTTGAGG TTCACGTCTTCAAAAGAGCGTGAAAAAACGGGTTTTCACAACTTCACAAGAGTGTGGCGAGCAAATGAATAGTTTGGCGTTTGTACAAGCACCATCAGCG TCTGGGGCAGCCCAATTACACAGGATCGAGCCTTCCTCAAAAACCGGAGCTTGAGCCTGTCCGCTACGGATTGGTTGCACGAATCGCACGCTTTGACCAT AAGTCGAATTGCCACAGGCGCCCATGAATGCGTTCATAGGCAGATTAGCCCGGCAGGAAGCGTGTGCTGAAGTTGCAAAGAATTGCGAAACGGACATGGC GATCCTGGCCATGGGTAACCTGGGGCAACACGTGAACCGCCCCGTCACTCCTGGCAGCCATGCCGTCAATTTGGTGCTGCAGATTTTGGAGACGCGTTAA
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| DNA Sequence for Gene |
>PseBG33_0929
|mqo_1
ATGGCGCATAACGAAGCAGTCGACGTAGTTCTGGTAGGGGCCGGCATCATGAGTGCCACCCTGGCCGTACTGCTCAAGGAGCTCGACCCCGGCCTCAAGC TGGAAGTCGTTGAGCTGATGGATTCGGGTGCCGCGGAGAGTTCCAACCCGTGGAACAACGCCGGTACCGGCCACGCCGGGCTGTGTGAGCTGAACTACAC GCCACAGGCCGCCGATGGCTCCATCGACATCAAGAAAGCCGTGCACATCAACACCCAGTTCGAGGTGTCGAAACAGTTCTGGGCGTACCTGACTAAGAAG GGCACCTTTGGCTCGTCCAAGTCGTTCATCAGCCCGGTCCCGCACCTGAGCTTCGTGCAGGGCGACAAAGGCGTTTCCTTCCTCAAGAAACGCTTTGAGA CCCTCAGCCAGCACCACGCGTTTTCGGACATGCACTACACCGAAGACCGCAGCGAAATGGCCGAGTGGATGCCGCTGATGATGCCGGGCCGCCCGCTTGA CGAAAAAATCGCCGCGACCCGCGTGATGAACGGCACCGACGTCAACTTCGGCGCCCTGACCAATCAGTTGCTCAGCCACCTGACCAGTTCGCCTGATGCC CAGGTCAAATACTGCAAGCGCGTCACCGGCCTCAAGCGTAACGGCGCCGGCTGGACCGTGAGCATCAAGGACGTCAACAGCGGCAACAGCCGCGAGGTGG ACGCCAAGTTCGTGTTCCTCGGCGCCGGTGGTGCGGCCCTGCCGCTGCTGCAAGCCTCGGGCATCGAAGAAAGCAAAGGCTTCGGCGGTTTCCCGGTCAG TGGCCAGTGGCTGCGTTGCGACAACCCTGAAGTGGTCAAACAGCACCAGGCCAAGGTCTATAGCCAGGCTGCCGTGGGTTCGCCGCCCATGTCCGTGCCG CACCTGGACACCCGCGTGGTGGATGGCAAGAAGTCGCTGTTGTTCGGGCCATACGCAGGCTTTACCACCAAGTTCCTCAAGCACGGCTCGTTCCTTGACC TGCCGATGTCGATTCGCGCTGGCAATATTGGCCCGATGCTGGCCGTGGCCCGCGACAACATGGACCTGACCAAGTACCTGGTCAGCGAAGTGCGCCAATC CATGGAGCAGCGCCTGGAATCCCTGCGTCGCTTCTACCCCGAGGCGAAAGCCGAAGACTGGCGCCTGGAAGTGGCCGGCCAGCGGGTGCAGATCATCAAG AAAGACCCGAAGAAAGGCGGCGTGCTGCAATTCGGCACCGAGCTGGTGGCGGCCAAGGACGGTTCGCTCGCGGCGCTGCTGGGCGCATCTCCGGGTGCCT CGGTGACCGTATCGATCATGCTGGAGCTGATTGAACGCTGCTTCCCGCAGAAGGCTGCCGGTGAATGGGCGAGCAAGCTGCACGAGATCTTCCCGGCGCG GGAAAAGGTCCTGGAGACGGATGCCGAGCTGTATCGCAAGATCAACACGCAGAACAACATCAGCCTTGAGCTGGTGGAGCAAAGCAACGAAGCCCAAAGC TACGCTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTTTGAATGCAAAAAAAAACGCCCCTCGGGGCGTTTTTTGTGGCTCGGATAATCAGCCGCGTGCTTTGTCGATCAGCTCGATGTATTCAGCGGCGTTGC GCTGGTCCTTGATCAGATCAACGAAGGTCTGGCCATGCTCGTCCTGGCCATCCAGGTCCAGGCCTGCTTCTTGGAAAAAGCCCAGGAAACGCTCGAAGTC GTCGATACGCAGGCCGCGATAGGCCTTGATCAGTTTGTGCAGGGACGGCGAAGTCGCATCAACCGGCTCGAAGTCCAGGAACAACTTGATTTGGTCGTCA CCGATCTCGTCACCAATCACCTGTTTCTTATCTTTACGCATTACCGACTCCAGCCTGCAGACATTTACACGGGGTTTGAAGTCTACCTGCGCGACGCAGG ATGTGGGAGGGGCTCAATCGAACTGGGCAAGCATCCAGCGGTGATACTCCGCCATACCCGCCTCGCCTTCACGGGGCGCCCAGCTTGCCAGCTCACCTTC
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| Amino Acid Sequence |
>malate:quinone oxidoreductase
MAHNEAVDVVLVGAGIMSATLAVLLKELDPGLKLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGSIDIKKAVHINTQFEVSKQFWAYLTKK GTFGSSKSFISPVPHLSFVQGDKGVSFLKKRFETLSQHHAFSDMHYTEDRSEMAEWMPLMMPGRPLDEKIAATRVMNGTDVNFGALTNQLLSHLTSSPDA QVKYCKRVTGLKRNGAGWTVSIKDVNSGNSREVDAKFVFLGAGGAALPLLQASGIEESKGFGGFPVSGQWLRCDNPEVVKQHQAKVYSQAAVGSPPMSVP HLDTRVVDGKKSLLFGPYAGFTTKFLKHGSFLDLPMSIRAGNIGPMLAVARDNMDLTKYLVSEVRQSMEQRLESLRRFYPEAKAEDWRLEVAGQRVQIIK KDPKKGGVLQFGTELVAAKDGSLAALLGASPGASVTVSIMLELIERCFPQKAAGEWASKLHEIFPAREKVLETDAELYRKINTQNNISLELVEQSNEAQS YA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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