Pseudomonas synxantha BG33R, PseBG33_0040

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas synxantha BG33R chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGATTATCAGCGGGCTCTCGCTGGGGGTTCTGGTGGTGGAAGCCAGCATGGCCAGCGGTTCGCTGATCACCGCACGGCTGGCCGCAGAGCAAGGGCGCG AGGTGTATGCGATCCCGGGCTCCATTCACCATCCCGGTGCCAAGGGTTGCCATCAACTGATCCGTGATGGCGCGGTGCTGGTGGAAACCATCGAACACAT CCTTGAGGCGCTGCGCGGTTGGCAGGCGTTATCGCGCCCTGCGCCGGTGCCGATCACCCACCCACTGGTGGCACTGCTGCATGCTGCGCCGCATACCAGT GAAGCCCTGGCGATTGCCAGTGGTCGGCCGTTGTCCCAGGTGCTGGCGACTCTTACGGAGCTGGAGCTGGAAGGCCAGGTCATCTGCGAAAGCGGGTGCT GGCTGGCGCGTTGCCAGGTTTAGGGGCTGCCGGTTTTTGGCGCTGGGTTTTGTAACGAAGATCGGTAAACTGCCCAGAGCTTTAGTCCGGAGATTAAATA
DNA Sequence for Gene
>PseBG33_0040
ATGGTCAACAGGTGGCGTGTGCTGCAAGCCGCACGGGAAATTCGCGCAGGCGCGGTGATTGCCTATCCGACCGAGGCGGTCTGGGGCCTGGGTTGCGACC CGTGGAATGAAGAAGCGGTGGATCGGCTATTGGCGATCAAGAACCGCTCGGTGGACAAGGGCCTGATTCTGGTAGCGGACAACATTCGTCAATTCGACTT CCTGTTCGAAGACTTCCCGGACACCTGGATCGATCGCATGGCCAGCACCTGGCCCGGGCCGAATACCTGGCTGGTGCCCCACCAGGACTTGTTGCCCGAA TGGGTCACGGGTATGCATGACACCGTGGCGTTGCGGGTTACTGATCACCCATTGGTGAGAGATTTGTGCGCCCAGGTCGGGCCGTTGATCTCCACGTCGG CCAACCCTCAGGGGCGCCCGGCGGCACGCACGCGTATTCGCGTGGAGCAGTATTTCCGCGGGCAAGTGGACTTGGTGTTGGGTGGCGCGCTGGGTGGGCG CAAGAACCCAAGCCTGATTCGGGACCTGGCGACAGGTGAGGTCGTGCGCCCCTCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GACCGAGGCGCGGCCATCGCGGGCAAGCCCGGCTCCCATATTTGATCAGTCACCGCGGTCAAATGTGGGAGCTGGCTTGCCTGCGATGACGCACTCAAGG CAACAGAATGGTTGAGCCAGTCGTGCGTCGCGCCGACAACTCCGTCTGCGCTTTGGCCGCATCCGCCAGCGGGTAGCGCTGTTTGATATCAATGCGCACC TTGCCACTCTTGATCATCGAAAACAGATCGTCCGCCATCGCCTGCAAGTTCGCCGGATTGTTGGCGTAGGTCGCCAGCGTCGGGCGGGTCACGTACAGCG AGCCCTTGGCCGACAGAATGCCCAGGTTCACCCCGTCCACCGCGCCCGACGCATTGCCAAAGCTTACGACCAAACCCCGTGGCGCCACGCTGTCCAGAGA GGTCAGCCAGGTGTCCTTGCCGACGCCGTCGTACACCACCGGCACCTTTTTACCGTCAGTCAATTCCAGCACACGTTGTGCGACATTCTCCTTGCTGTAG
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MVNRWRVLQAAREIRAGAVIAYPTEAVWGLGCDPWNEEAVDRLLAIKNRSVDKGLILVADNIRQFDFLFEDFPDTWIDRMASTWPGPNTWLVPHQDLLPE WVTGMHDTVALRVTDHPLVRDLCAQVGPLISTSANPQGRPAARTRIRVEQYFRGQVDLVLGGALGGRKNPSLIRDLATGEVVRPS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site